| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0394 |
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| Symbol | |
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| ID | 8708870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 424421 |
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| End bp | 425161 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646482510 |
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| Product | phosphoglycerate mutase 1 family protein |
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| Protein accession | YP_003373643 |
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| Protein GI | 283782889 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0588] Phosphoglycerate mutase 1 |
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| TIGRFAM ID | [TIGR01258] phosphoglycerate mutase, BPG-dependent, family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATATA AATTAGTATT GCTCCGACAT GGTCAGAGCG CATGGAATAA GACCAATCAG
TTCACTGGTT GGGTTGATGT ACCGCTGACT GAGCAGGGTG TTGAGGAAGC TAAGCATGGT
GGCGAGCTTC TTAAAGAGAA GAATGTTCTT CCAGACATCG TGTTCACTTC TTTGCTTCGT
CGTGCTATCA ATACCGCGAA TTACGCGCTT GATGCAGCCG ACCGCCTTTG GATTCCAGTT
CGTCGTAGCT GGCGTTTAAA CGAGCGTCAT TATGGTGCTT TGCAAGGTAA GAACAAGTCT
GAGATTCGTC AGGAATATGG CGATGAGAAG TTCATGATTT GGCGTCGTTC TTACGCAACT
CCACCTCCTG AGATTGATCC GAACGATGAG TATTCTCAGA CGAATGATCC TCGTTACGCA
GGCGATCCAG TTCCAGAAAC TGAAGCTTTG GCAAACGTCG TGACTCGCGT AACTCCTTAC
TGGGAGTCGG ATATTATTCC AGAGCTTAAG TCCGGCAAGA CTGTAATGAT TGCTGCTCAC
GGCAATAGCT TGCGCGCAAT CGTTAAGATG CTCGATAACT TGAGCGAGGA AGAGATTTCC
AAGGTGAACA TTCCAACCGC TATTCCTCTG CTTTACGAGT TGGATGAAAA CTTCAAGCCA
ATCAAGCCTC GCGGTGAGTA TTTGGATCCA GAAGCTGCTG CTGCTGGTGC TGCTGCCGTG
GCTGCTCAGG GTCAGAAGTG A
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| Protein sequence | MTYKLVLLRH GQSAWNKTNQ FTGWVDVPLT EQGVEEAKHG GELLKEKNVL PDIVFTSLLR
RAINTANYAL DAADRLWIPV RRSWRLNERH YGALQGKNKS EIRQEYGDEK FMIWRRSYAT
PPPEIDPNDE YSQTNDPRYA GDPVPETEAL ANVVTRVTPY WESDIIPELK SGKTVMIAAH
GNSLRAIVKM LDNLSEEEIS KVNIPTAIPL LYELDENFKP IKPRGEYLDP EAAAAGAAAV
AAQGQK
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