Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0372 |
Symbol | |
ID | 8709576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | + |
Start bp | 400945 |
End bp | 401391 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 646482488 |
Product | hypothetical protein |
Protein accession | YP_003373622 |
Protein GI | 283782868 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTTG GAGACATAGC TGCTCTTATT GCCGCGATTG CGTTTACTGT GCTTTCGGGT TTTTTGATTT ATCCGCTAAT TAGATTGGGC AAGTTGTTCG ATCAGATTGC GAAAACTGTC AAAGAGTCGG GTGAGCATGC GATGCCTGCA ATTGACGAGT CTGTGACGAC GATTAAGCAA GTTAATAAGA CTCTTGACGA TGTAAACGCT GTTTCAGGAG CTACGCGCAC AACTGTTACG AATATTGGTG CTCTTACTGA TTTGTATGGT GCTTTCCTTG GAAAACCGCT CGTAAAAATT GCAGCTGCCG GTTACGCTCT AAAAGATACT GTTTCTTCTT TCTTCAATAA GCCGACTGTG CCAACAGACA AGAATAGTGC CAATCGTAAC GCTTCAAAAG AATCCTCTGA TAAGAATGCA ACTAAGAATG CAAGCAGGGG GGAGTAA
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Protein sequence | MSVGDIAALI AAIAFTVLSG FLIYPLIRLG KLFDQIAKTV KESGEHAMPA IDESVTTIKQ VNKTLDDVNA VSGATRTTVT NIGALTDLYG AFLGKPLVKI AAAGYALKDT VSSFFNKPTV PTDKNSANRN ASKESSDKNA TKNASRGE
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