Gene HMPREF0424_0372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0372 
Symbol 
ID8709576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand
Start bp400945 
End bp401391 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content44% 
IMG OID646482488 
Producthypothetical protein 
Protein accessionYP_003373622 
Protein GI283782868 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTTG GAGACATAGC TGCTCTTATT GCCGCGATTG CGTTTACTGT GCTTTCGGGT 
TTTTTGATTT ATCCGCTAAT TAGATTGGGC AAGTTGTTCG ATCAGATTGC GAAAACTGTC
AAAGAGTCGG GTGAGCATGC GATGCCTGCA ATTGACGAGT CTGTGACGAC GATTAAGCAA
GTTAATAAGA CTCTTGACGA TGTAAACGCT GTTTCAGGAG CTACGCGCAC AACTGTTACG
AATATTGGTG CTCTTACTGA TTTGTATGGT GCTTTCCTTG GAAAACCGCT CGTAAAAATT
GCAGCTGCCG GTTACGCTCT AAAAGATACT GTTTCTTCTT TCTTCAATAA GCCGACTGTG
CCAACAGACA AGAATAGTGC CAATCGTAAC GCTTCAAAAG AATCCTCTGA TAAGAATGCA
ACTAAGAATG CAAGCAGGGG GGAGTAA
 
Protein sequence
MSVGDIAALI AAIAFTVLSG FLIYPLIRLG KLFDQIAKTV KESGEHAMPA IDESVTTIKQ 
VNKTLDDVNA VSGATRTTVT NIGALTDLYG AFLGKPLVKI AAAGYALKDT VSSFFNKPTV
PTDKNSANRN ASKESSDKNA TKNASRGE