| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0348 |
|---|
| Symbol | rplS |
|---|
| ID | 8709274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gardnerella vaginalis 409-05 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013721 |
|---|
| Strand | + |
|---|
| Start bp | 375195 |
|---|
| End bp | 375560 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 646482464 |
|---|
| Product | ribosomal protein L19 |
|---|
| Protein accession | YP_003373599 |
|---|
| Protein GI | 283782845 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0335] Ribosomal protein L19 |
|---|
| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAATG CTGTAGAAGC ATTTGATGCT AAGCATCTTA AGGCTGCTGA AGAAATTCCA
GCTTTCCGTC CTGGCGATAC CGTTGACGTC AACGTTAAGA TTCAGGAAGG CAACAACACT
CGTATTCAGA CTTTCACCGG CGTTGTGATT GCTCGTAAGG GTGCTGGCGT GCGTGAAACT
TTCGTTGTTC GTAAGGTGAG CTTCGGCACT GGTGTTGAGC GTCGTTTCCC ACTTCATTCT
CCAGCTATCG ATTCGATTAA GCTGGTTCGT AGCGGTCGCG TTCGTCGCGC TAAGCTGTAC
TACTTGCGCG CTTTGCGTGG TAAGGCTGCT CGTATTGCTG AGCGTCGCGA TAACTCTGCT
AAGTAA
|
|---|
| Protein sequence | MVNAVEAFDA KHLKAAEEIP AFRPGDTVDV NVKIQEGNNT RIQTFTGVVI ARKGAGVRET
FVVRKVSFGT GVERRFPLHS PAIDSIKLVR SGRVRRAKLY YLRALRGKAA RIAERRDNSA
K
|
|---|
| |