| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0343 |
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| Symbol | pgi |
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| ID | 8710039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 369067 |
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| End bp | 370761 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646482460 |
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| Product | glucose-6-phosphate isomerase |
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| Protein accession | YP_003373595 |
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| Protein GI | 283782841 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0166] Glucose-6-phosphate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCA ATCCGCCAGT TGACGCCGTA AAAACCCCAG AGTGGGCTGC ATTGCAGAAG
CATTACGACG AGTTGCAATC AGAAGGCGTT TGCCTGAAGA AGTGGTTTGC CGAGGACGCA
AATCGCGTGG ATAAGTTGAG CTTCGAAGCT GGAGATCTCC ACTTCGATCT TTCTAAGAAT
TTAATTAAGC CTGAAACTCT TAAGCTTTTC GCAAACCTTG CAAAGGCAGT CAAGCTTGAC
GAGCGCACTA AGGCAATGTA CACCGGCGTG CACATTAACA ATACTGAAGA TCGTGCAGTT
TTGCACACTG CTTTGCGTCG TCCTGCAGAG GATGCTGGCA AGTTCATTGT TGACGGTCAA
GATACCGTTG CAGACGTGCG TGAAGTGTTG GGTCGCATTT ACGATTTTGC TAACGAAGTT
CGTTCTGGCG CTTGGAAGGG CGTTACCGGC AAGAACATCA AGACTGTTGT AAACATTGGT
ATTGGCGGTT CCGATTTGGG TCCAGTCATG GTTTACGAAG CCTTGAAGCC ATACGCTGAC
GCCGGCATCA GCGCTCGCTA CGTTTCTAAC ATTGATCCAA ACGATATGGC AGAAAAGACC
AAGGATTTGG ATCCAGAAAC CACTTTGTTC ATCATTGTTT CCAAGACCTT CACCACTTTG
GAGACTTTGA CCAATGCTCG TACCGCTCGC ACTTGGTTGC TGAACAAGCT TCAGGAGTGC
GGTGCTATTG ACGGAAGCGA CGCAAAGAAG GCTGAAGCTG TTGCTAAGCA CTTCGTGGCT
GTTTCCACCA ACCTTGAGAA GGTTGAAGAG TTCGGCATCA ACCCAACCAA CGCTTTTGGC
TTCTGGAGCT GGGTTGGCGG CCGCTACTCT GTGGATTCCG CTGTCGGCAC TTCTTTGGCT
GTTGTCCTCG GTCCAGAGCG TTTCGAAGAG TTCTTGAAGG GCTTCCACGC AATCGATACC
TACTTCGCTG AGACTCCATT CGAGAAGAAC GTTGTTGTGC TTCTTGGTAT GCTCAACGTT
TGGTACCGCA ATTTCTACAA GGTTGCTTCT CACGCTGTGC TTCCATACGA TCAGTACTTG
CACCGCTTCC CAGCTTATTT GCAGCAGCTC ACCATGGAAT CTAACGGTAA GTCTGTGCGC
TGGGACGGCA CTCCTGTAAC AAGCGAAACC GGCGAAATCT TCTGGGGCGA GCCAGGCACC
AACGGTCAGC ACGCTTTCTA CCAGTTGATT CACCAGGGCA CTCAGCTTAT TCCAGCTGAT
TTCATTGCTT TCGTGAACAC GCCAAATCCT ACTAAGGATG GCGATCAGGA TGTGCACGAG
CTCTTCTTGG GCAACTATCT TGCACAGACT AAGGCTCTTG CTTTCGGCAA GACTGCTGAT
GAAGTTCGCG CTGAAGGCAC TCCAGAGGAG ATTGTGCCAG CTCGCGTGTT CAAGGGCAAC
CGTCCAACCA CGTCCATTTT CGGCGATGCT TTGACTCCAT TTAGCTTGGG TGAGTTGATT
GCTCTCTACG AGCACATCAC CTTCGTTGAA GGTACCGTGT GGGGCTTGGA TTCCTACGAT
CAGTGGGGTG TGGAGCTTGG AAAGCAGCTT GCAAAGCAGA TTACTCCTGC AATTTCTAAG
GATGATGAAG CTTTGGCAGC TCAGGATGCT TCTACGCAGA GCTTGATTCG CTTCTATCGC
GCTCATCGCA AGTAA
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| Protein sequence | MAINPPVDAV KTPEWAALQK HYDELQSEGV CLKKWFAEDA NRVDKLSFEA GDLHFDLSKN
LIKPETLKLF ANLAKAVKLD ERTKAMYTGV HINNTEDRAV LHTALRRPAE DAGKFIVDGQ
DTVADVREVL GRIYDFANEV RSGAWKGVTG KNIKTVVNIG IGGSDLGPVM VYEALKPYAD
AGISARYVSN IDPNDMAEKT KDLDPETTLF IIVSKTFTTL ETLTNARTAR TWLLNKLQEC
GAIDGSDAKK AEAVAKHFVA VSTNLEKVEE FGINPTNAFG FWSWVGGRYS VDSAVGTSLA
VVLGPERFEE FLKGFHAIDT YFAETPFEKN VVVLLGMLNV WYRNFYKVAS HAVLPYDQYL
HRFPAYLQQL TMESNGKSVR WDGTPVTSET GEIFWGEPGT NGQHAFYQLI HQGTQLIPAD
FIAFVNTPNP TKDGDQDVHE LFLGNYLAQT KALAFGKTAD EVRAEGTPEE IVPARVFKGN
RPTTSIFGDA LTPFSLGELI ALYEHITFVE GTVWGLDSYD QWGVELGKQL AKQITPAISK
DDEALAAQDA STQSLIRFYR AHRK
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