Gene HMPREF0424_0332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0332 
SymbolcoaD 
ID8709167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand+ 
Start bp361257 
End bp361805 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content40% 
IMG OID646482449 
Productpantetheine-phosphate adenylyltransferase 
Protein accessionYP_003373586 
Protein GI283782832 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0669] Phosphopantetheine adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR01510] pantetheine-phosphate adenylyltransferase, bacterial 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATAG CTGTGTGCCC CGGCTCGTAT GATCCAGTCA CTGCCGGCCA TTTAGACGTA 
ATACAACGTT GTACGCATCT ATTTGATGAA GTACATGTGC TAGTTGCGGT AAATGCTGCA 
AAGACTCCGT TATTTTCTGA ATCTGAGCGC GTAAAAATTA TTCAAGAAGC AATAAATAAT 
TTGCCGCAAT CTCAAAATAG CTTCAATCGC GATTGCAAAA TAGTAGTAAC TTCAACAGCT 
GGTTTGATTA CTGACTACTG TACAAAAGTT GGTGCTACAG TAATCGTAAA AGGCTTACGT 
CAAAACGGTG ATTATGAGGC AGAACTTGGA ATGGCACTAG TGAACCGCAA ATTAGCAGGT 
ATCGAAACGC TTTTCCTGCC TGCTGATCCT GTGCTTGAGC ATGTTTCAAG CTCTGTGGTT 
AAAGATGTTG CTCGTCATGG GGGAAATGTT ACTGGCATGG TTCCAGATAA CGTAATACCC 
TTATTAAAAA AGCTTTTTAG TGAGCAATCA TTAGGCGTAG ATAATAATTC ATCTATGCTG 
AACAATTGA
 
Protein sequence
MTIAVCPGSY DPVTAGHLDV IQRCTHLFDE VHVLVAVNAA KTPLFSESER VKIIQEAINN 
LPQSQNSFNR DCKIVVTSTA GLITDYCTKV GATVIVKGLR QNGDYEAELG MALVNRKLAG 
IETLFLPADP VLEHVSSSVV KDVARHGGNV TGMVPDNVIP LLKKLFSEQS LGVDNNSSML 
NN