| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0319 |
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| Symbol | |
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| ID | 8709087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 347749 |
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| End bp | 348687 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646482436 |
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| Product | inosine-uridine preferring nucleoside hydrolase |
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| Protein accession | YP_003373573 |
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| Protein GI | 283782819 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.182819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCAA TCATCCTAGA TTGCGATCCT GGTCATGATG ACGCCATGGC TATTCTGTTG
GCACTTGGTA ACCCAAATAT TGAGTTGCTC GGCGTAACTA CAGTTGGCGG CAACCAAAGT
CTCGAAAAAG TCACGTATAA TGCGCGTGCA ACTCTCGAAA TGGCTCGTGC AACTCACATT
CCAGTTCACG CAGGCTGCGA CCGACCAATG GTCCGCCCTC TGGAAGTTGC GGCTTCCGTG
CACGGCGAAA GTGGCTTAGA CGGCGTAACG CTTCCAGAAC CAACGCGACC ATTGGACGAA
GGCCACGCTG TAAATTGGAT TATTGATACG ATTATGAGCA ACGAACCTGG CACGATTACG
CTTGTACCAA CTGGTCCGCT CACCAATATT GCTATGGCAG TGCGCCTTGA GCCACGAATC
GTGAGACGTG TGAAGGAAGT TGTGCTCATG GGCGGCGGAT ATCACGTTGG TAATTGGAGC
GCGGTTGCTG AGTTTAATAT TAAGGTTGAT CCAGAATCTG CGCATGTTGT GTTTAATGAG
GATTGGCCTA TTACTATGGT CGGCCTTGAT TTGACGCATC AGGCACTTTG CACTCCTGAA
GTGCAAGCAA AGATTAATGC TATTGGCACG TCTCTTTCTG CGTTTGCTAG CGGTTTGATG
GACTTCTTCC GTAAAGCGTA TAAGGATAAT CAAGACTTTA TTGATCCGCC AGTTCATGAT
CCTTGCACGA TTGCTTATTT GATTGACCAC AGTGTGGTGG CTACTCGTCG CTGCCCTGTA
GACGTTGAAA TTAAGGGCGA ATTAACAGTT GGTATGACCG TTGCAGATTT GCGCGGACCA
GAACCATCCG CAGAAGAATG CCATACGCAA GTTGCAACCA AACTTGATTT CGATAAATTC
TGGGATTTGA TTATTGACGC GCTGAAGCGT ATCGGCTGA
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| Protein sequence | MTSIILDCDP GHDDAMAILL ALGNPNIELL GVTTVGGNQS LEKVTYNARA TLEMARATHI
PVHAGCDRPM VRPLEVAASV HGESGLDGVT LPEPTRPLDE GHAVNWIIDT IMSNEPGTIT
LVPTGPLTNI AMAVRLEPRI VRRVKEVVLM GGGYHVGNWS AVAEFNIKVD PESAHVVFNE
DWPITMVGLD LTHQALCTPE VQAKINAIGT SLSAFASGLM DFFRKAYKDN QDFIDPPVHD
PCTIAYLIDH SVVATRRCPV DVEIKGELTV GMTVADLRGP EPSAEECHTQ VATKLDFDKF
WDLIIDALKR IG
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