| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0317 |
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| Symbol | |
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| ID | 8709534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 346280 |
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| End bp | 347428 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646482434 |
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| Product | kinase, PfkB family |
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| Protein accession | YP_003373571 |
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| Protein GI | 283782817 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.196123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGAAC GCGAACAACA AATCTTGACT TGGATTCAAC AAAACCCGAT GATTAGCCAA
CAGGAACTTG CAAATCTCGC AGGAATTACT CGTTCAGGTG TGGCTGCTCA TATTTCCAAT
TTAATTCGCA AAGGATATTT ACGAGGTAAG GGATATATTG TTACTCCTCC AAGTTATGTG
ACTGTTGTTG GCGGAATTAG CATGGATGTT CTTGGCATTG CTTGCGGAGA TTTGATGGAT
TACACGTCTA ATGCTTCCTG TGTGCGCTAT ATGCTAGGCG GTGTTGGAAG GAATATTGCA
GTCGCGTTGG AACGTCTTAA TATTCGCACA AGCATGGTTT CTGTCTACGG TGGCGATCAC
AACGGAGAGC TTTTCCGCAT TGATGCTGCT GCAAACGGTT TAGATATTGG TTATGCGAAG
CAACTTCCTG AGTCGATGAC TGCTTCGTAC ATGTATGTTG GTGACGCTTC TGGTCAGCGT
TTGCTTGCTT TAGACGATAT GAGTATTTAC GACCACATGA CTCCTGATTT TTTGCGTGAG
CGCATGTCCA TTATTGAAAA TGCTGATATT TTGGTGTTGG ATACTAATAT TCCGCAAAAG
TCAATTGAGT GGCTATGTGA CCGTTATCGC CGTCCTATTA TTGTTCGTGC AATTACGGAT
GCAAAAGCTC CTCGAGTGCT TTCTAGATTG TCTCGTATTG ACACTCTTAT TTTAGATACT
GCTGAATCGC AGGCTTTAAC TGGCGTTAAT GCTGTTGACG AGCGTTCTGC AATTCGCTGT
GCGAATGTGC TTCTCAAGCG TGGAGTAAAA CGTGTATTTG TAAATGCCGG TCGCGCAGGA
GTTGCTTATG GTGTTGCAGA TGAGGGAGTG TCGTTCTATC CTGTCCCAGT TAAGCGCGTC
CAGAGAATGA TGCTAACTCG CGGAAATAGC AATGTTGGTG TTGAAGCAGT CGGCAACGAC
AACGGTTCTA GCGATGCTGC TACTGCGGCG CTTATTTACG CGCGATATAA CGAATTTGAT
TCTTCAAAAA CTGGCAGATT TGCGGTTGCT GCTGCAGCTT TGAATACTGA ATCTATGCAG
CCTGTACATG AGTTGTTTAA TCCAGAACTT ATTTCTCAAC GCATGACGAA TATTCATGAG
CGCATTTAA
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| Protein sequence | MTEREQQILT WIQQNPMISQ QELANLAGIT RSGVAAHISN LIRKGYLRGK GYIVTPPSYV
TVVGGISMDV LGIACGDLMD YTSNASCVRY MLGGVGRNIA VALERLNIRT SMVSVYGGDH
NGELFRIDAA ANGLDIGYAK QLPESMTASY MYVGDASGQR LLALDDMSIY DHMTPDFLRE
RMSIIENADI LVLDTNIPQK SIEWLCDRYR RPIIVRAITD AKAPRVLSRL SRIDTLILDT
AESQALTGVN AVDERSAIRC ANVLLKRGVK RVFVNAGRAG VAYGVADEGV SFYPVPVKRV
QRMMLTRGNS NVGVEAVGND NGSSDAATAA LIYARYNEFD SSKTGRFAVA AAALNTESMQ
PVHELFNPEL ISQRMTNIHE RI
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