| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0308 |
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| Symbol | rpsF |
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| ID | 8708983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 336198 |
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| End bp | 336494 |
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| Gene Length | 297 bp |
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| Protein Length | 98 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646482425 |
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| Product | ribosomal protein S6 |
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| Protein accession | YP_003373562 |
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| Protein GI | 283782808 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0360] Ribosomal protein S6 |
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| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.052599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGCAC ATAAGTATGA ACTGATGTTC ATTGCAAATC CTGAGCTGGA TGAGCACGGT
CTTAAGAAGT TGACCGAGCA GTATCTTGAG CTTGTCACCA ACGAGGGCGG TTCCGTTGAC
GGCACCGATT ACTGGGGTCG CCGCAAGTTT GCCTACGAAA TTGAAGGCAA AACCGAAGGT
AACTACGTTG TGGTGAACTA CACTGCCGAG CCATCTGTAA GTGACGAACT TGACCGTGTT
TTGAACCTTA ATGAATCTGT AATCCGCACG AAGATTCTTC GCAAGGACGC TAAGTAA
|
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| Protein sequence | MSAHKYELMF IANPELDEHG LKKLTEQYLE LVTNEGGSVD GTDYWGRRKF AYEIEGKTEG
NYVVVNYTAE PSVSDELDRV LNLNESVIRT KILRKDAK
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