| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0300 |
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| Symbol | |
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| ID | 8709056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 323221 |
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| End bp | 325038 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646482418 |
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| Product | ErfK/YbiS/YcfS/YnhG |
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| Protein accession | YP_003373555 |
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| Protein GI | 283782801 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.271211 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAT TACAGCAAAA TTTTGAGGGA GATGAATCCC TCAATATTAC ACCTAGTAAT
ATGCCTGATG ATGCTAGTGA CGATACTGTT GCTTTTATGC AGGTTCCTCA AAGTCATGTA
GAAGATCAAA TAGCTGATAA TTCTGTTAAT TATGAGGGAA CTCTTGCTGA TAATTTAGGC
GAAGTCGCCG ATGAAGAAGA TACTTCTGGA GACATTGTTG ACGATATCGT TGAAGATATT
GCGGGTAATA AGAAGAATGT GTTTGGTAAT AATGCTGCAT CTTATGGCAT GTATGCAAAT
GCAACTCCTG CCGATTCAAC TGCAACCGAT TCATTTAGAG TAGTAGAGCC GAAAGCAAAG
AAACATCGTA CGAATCGTTC CGCACTGGCG TTGATGTATT CGCTTCTTAT CTTTGTTATT
TTGTTAGCAG CAGCATTTTT TGCACTTCAT TTGTATTTCA ACAATCGAGT TGCTCCAGGT
GTTGATTTTG GTGATGCTTC TATTACGCGC AATCTCACTG GCTATCAGGA AGATTCTGTA
AGCAAGACTG TTCAGAATGC TGTGGATCAT AGCGAATTAG AAATTAGTGA CGATCAAGGA
AATAGTATTG ATGCAGATTT GAGTCAGCTT GGTGTCAAGA TTGATAAGAA CGCAACTGTA
AAAGCTATTA TGAATGCTAA GCGAGATAAT TTATTTACTC GTATTATGCC TTGGGTTCAT
CAAACTGTGA GCTTGAAAGC TGTACGTGAT GATTCTGCTT TGGATTCGTA CTTATTGCAT
AAGTTTATTC GTGAGAAGGA TCGTGCTGTA CCTTATAGTG CAGTTTTCGA CAAGGATTCT
GAATCTTACA AGGTAGAGGA TGGCATACCT GGTCGCACTA TAGAAACTAT GTCTGTTCGT
GAAGCAGTAA AAAAGTTAAT TGCTTACCCT GGTAAAACAG TAAAAGTTTC TGTTACATCT
CGACGCACTG ACGCTCCTAT TAAGCTTGAT GCAGCGCAGA AACTTGTAAA TGATTTAAAT
AAACTTCTTG AGAAAAAAAT CACGTTTAAT AACGGTGACG GTAAAGATTT TACGGTTCCA
AAAGAAGCGA TTGCGTCTTG GATCAGTATA AAAGCAGATA CGACTCGCCG TAAGCTTTCT
TACACAATTG ATGCAGATAA AGCAGATTAT TATTTGTCTC AAGTTCTTCC AAAAGAACTT
AATCAGCAAA AAATTAATCA AGAAGATGCA ATTGATAAAG AAGGTAGGTT TATTTTCACA
ACGCTTAAAG GTTCTAATGG TGTTGAAATT AACTATTCCA ATAGTGTTGC GAAAAAGGCT
GTAGAATCTT TGCGCAATGG CAATGATTTC AAGATGGCTG TTCCTGCGAA AATCACTAAG
TTTACCGTTG AAAAGAAGCT TGTTGAAATG CGCATTGTTG TTGACAAAAC AACCCAAACG
GCTTCTGTTT ATAAGAATGA TGAACTTGTA AAAACATTCC CTGTTTGCAC AGGTAAGCGC
GGTGCTGATG ATTCAGCTTC CGGCACATTC TTTATTTACT TGCGTTATGC TTCACAAGAT
ATGCGCGGTA GGAACGGCGA TGGCTCTCCT TACTTCTCTC CTGGAGTGCG TTGGGTTAGC
TATTACCATG GTGGAGAAGG CTTCCACACT GCTTCTTGGA ATTATAAGGG TATTGCAACT
GGCGATGCTG CAAATCACGG CTCTCATGGT TGCATAAACA TGTATGAGCA GGATGCTCGC
TGGATTTTTG AAAATTGCCC ACGTGGCACT ATTGTACAAA TTGTTGGCAC GACTCCAGAT
GGTCCGGTAC GCGAATGA
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| Protein sequence | MAELQQNFEG DESLNITPSN MPDDASDDTV AFMQVPQSHV EDQIADNSVN YEGTLADNLG
EVADEEDTSG DIVDDIVEDI AGNKKNVFGN NAASYGMYAN ATPADSTATD SFRVVEPKAK
KHRTNRSALA LMYSLLIFVI LLAAAFFALH LYFNNRVAPG VDFGDASITR NLTGYQEDSV
SKTVQNAVDH SELEISDDQG NSIDADLSQL GVKIDKNATV KAIMNAKRDN LFTRIMPWVH
QTVSLKAVRD DSALDSYLLH KFIREKDRAV PYSAVFDKDS ESYKVEDGIP GRTIETMSVR
EAVKKLIAYP GKTVKVSVTS RRTDAPIKLD AAQKLVNDLN KLLEKKITFN NGDGKDFTVP
KEAIASWISI KADTTRRKLS YTIDADKADY YLSQVLPKEL NQQKINQEDA IDKEGRFIFT
TLKGSNGVEI NYSNSVAKKA VESLRNGNDF KMAVPAKITK FTVEKKLVEM RIVVDKTTQT
ASVYKNDELV KTFPVCTGKR GADDSASGTF FIYLRYASQD MRGRNGDGSP YFSPGVRWVS
YYHGGEGFHT ASWNYKGIAT GDAANHGSHG CINMYEQDAR WIFENCPRGT IVQIVGTTPD
GPVRE
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