| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0298 |
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| Symbol | pgm |
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| ID | 8708877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 320006 |
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| End bp | 321679 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 646482416 |
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| Product | phosphoglucomutase, alpha-D-glucose phosphate-specific |
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| Protein accession | YP_003373553 |
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| Protein GI | 283782799 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0033] Phosphoglucomutase |
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| TIGRFAM ID | [TIGR01132] phosphoglucomutase, alpha-D-glucose phosphate-specific |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGCAA AAAATGCGGG AATGCCCGCC ACCCCAGAAG ATCTAGTCGA CGTCGACGCT
TTGGTTGGCG CTTACTATGA TGAAGTTCCA AATTCCAACA TTCCAGAACA GCGCGTGATT
TTCGGCACGT CCGGTCATCG TGGTTCCGCT TTGAAAACTT CGTTTAACGA AGCTCATATT
GTGGCTATTA CGCAAGCTAT TGCTGAATAT CGCAAGAGCG CTGGCGTAAC TGGCCCTCTT
TATATTGGTC GCGATACGCA CGCTCTTTCT GAGCCTGCTC AAAAAACCGC TATTGAGGTT
TTGGTTGCTA ACGGAGTTCA CGTTCGCGTG GATTCTCGCG GCGACTTCGT GCCAACTCCT
GTTGTGTCCC AAGCTATTTT GACTCATAAT CGCGCAGCCG ACGGCACTCA GCGTTTTAGC
GGAGACGGCT TGGCTGATGG CATTGTTGTC ACTCCTTCGC ACAATCCTCC AACCGACGGT
GGTTTTAAGT ACGATCCTGT AACCGGCGGC CCTGCACCTG CAGACGTAAC TAATGCGATT
GCAAACCGCG CAAACGAATT GCTCGACAAC TACAAGTCCG TAAAGCGCGT GCCTTTCGAG
GAAGCAATCA AGTCTGATTT GGTTGAAGGC TTCGATTACC GCGAACATTA CGTAAGCGAC
TTGGCAAACG TAATCGACTT CGACGTGATT CGTTCCAGCG GCGTACGTTT GGGAATTGAC
CCACTCGGCG GCGCAAGCGT AAACTACTGG CCACTTATGA ACGAAAAGTA CGGCCTGAAC
ATTGGCGTTG TGCGTCCAGA AGTTGACCCA ACTTGGCGAT TCATGACTAT TGACCACGAT
GGCAAGATTC GTATGGACCC AAGCTCCCCT TACGCAATGA AGGGCTTAGT TGATCAGCTT
AACGCTGGCG CTTGGGATAA GTACGATTTG GTTGGCGGCA CCGATCCAGA TGCTGACCGT
CACGGTATTG TGTGCCCGAA CTGGGGCGTT ATGAACCCGA ACCATTACAT CGCGGTGTGC
GTGGAGTACT TGTTCGGCGG TGCTCGCCCA GATTGGCCAA AGAATACTGC TATCGGCAAG
ACGCTTGTGT CTTCTTCCTT GATTGACCGC GTAGCTGCTT CTATTAACGC AAAGCTTGTG
GAAGTTCCTG TTGGATTCAA GTGGTTCGTT GACCCACTCT TTAGCGGCGA AGTTGCTTTC
GGCGGCGAGG AAAGCTCCGG CATGAGCTTC TTGCGCAAAG ATGGTCGCGT GTGGACCACC
GATAAGGATG GTTTGATTCC TGATTTACTC GCTGCGGAAA TTACTGCAAA GACTGGCAAG
AACCCAGCTC AGCTTCACCA GGATCAGGTT GCGCGCTTTG GCGAAAGCTG GTATAAGCGC
GTTGATACCC CAACCACGCT TGAGCAGAAG CAGAAGTTCG CAGCTTTGAG CGGCAACGAC
GTGGAAGCAA CCAAGCTTGC CGGCGAAGAT ATTACCGCAA AGCTTACAGA AGCTCCTGGA
AACGGCGCAA AGATTGGTGG CTTGAAGGTG ACGACGAAGA ACAACTGGTT CGCTGCTCGC
CCATCTGGTA CCGAGAATAT TTACAAGGTT TACGCAGAAT CCTTCGTTTC TCCAGAAGCA
CTTGACAAGG TGCTTGAGGA AGCTACTGCT GTAGTCGACA AGGCTTTAGC GTAA
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| Protein sequence | MVAKNAGMPA TPEDLVDVDA LVGAYYDEVP NSNIPEQRVI FGTSGHRGSA LKTSFNEAHI
VAITQAIAEY RKSAGVTGPL YIGRDTHALS EPAQKTAIEV LVANGVHVRV DSRGDFVPTP
VVSQAILTHN RAADGTQRFS GDGLADGIVV TPSHNPPTDG GFKYDPVTGG PAPADVTNAI
ANRANELLDN YKSVKRVPFE EAIKSDLVEG FDYREHYVSD LANVIDFDVI RSSGVRLGID
PLGGASVNYW PLMNEKYGLN IGVVRPEVDP TWRFMTIDHD GKIRMDPSSP YAMKGLVDQL
NAGAWDKYDL VGGTDPDADR HGIVCPNWGV MNPNHYIAVC VEYLFGGARP DWPKNTAIGK
TLVSSSLIDR VAASINAKLV EVPVGFKWFV DPLFSGEVAF GGEESSGMSF LRKDGRVWTT
DKDGLIPDLL AAEITAKTGK NPAQLHQDQV ARFGESWYKR VDTPTTLEQK QKFAALSGND
VEATKLAGED ITAKLTEAPG NGAKIGGLKV TTKNNWFAAR PSGTENIYKV YAESFVSPEA
LDKVLEEATA VVDKALA
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