Gene HMPREF0424_0272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0272 
Symbol 
ID8709709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand+ 
Start bp294630 
End bp295190 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content46% 
IMG OID646482391 
Productadenylate kinase 
Protein accessionYP_003373529 
Protein GI283782775 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0563] Adenylate kinase and related kinases 
TIGRFAM ID[TIGR01351] adenylate kinases 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTAC TAATTATGGG TCCACAGGGC GTTGGAAAAG GCACTCAGGC CGCTTTGTTA 
AGTGAGCATT ATGGCATTCC AGCGATTTCT ACTGGTGATA TTTTCCGCTA TAACCTTAAG 
AATCATACTG AGCTTGGAAA ACAGGTTCAG GGATATCTTG ACAAGGGCGA GTTGGTTCCA 
GATGAGCTGA CTAACAGCAT TGTTAAGGAT CGTCTTGCTC AGGACGATGC AAAGAGCGGC 
TGGATTCTCG ACGGTTATCC TCGCAACGCT TCTCAGGTTC AAGCTTTGGA TCGTATGTTG 
GAAGAGCTTG GCACTCCTCT CGATCACGTT GTGGCTCTCG AGGCTGAGCG CGATGTTTTG 
CTCGAACGCA TGCAAAAGCG TGCAGTGGAG CAAGGTCGTT CTGACGATAC TCCAGAAGTA 
ATTGCTAAGC GTTTAGAAAC GTATGAGAAG GAAACAGCTC CATTGCTTGA TATCTATGAT 
AGCCGCGGTC AGTTGGTTGA AGTAGATGGC GTTGGAGATA TTAAGGAAAT CAATAATCGC 
ATTGTTGAAT CACTTAATTA A
 
Protein sequence
MRLLIMGPQG VGKGTQAALL SEHYGIPAIS TGDIFRYNLK NHTELGKQVQ GYLDKGELVP 
DELTNSIVKD RLAQDDAKSG WILDGYPRNA SQVQALDRML EELGTPLDHV VALEAERDVL 
LERMQKRAVE QGRSDDTPEV IAKRLETYEK ETAPLLDIYD SRGQLVEVDG VGDIKEINNR 
IVESLN