| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0262 |
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| Symbol | rpmC |
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| ID | 8709484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 288212 |
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| End bp | 288463 |
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| Gene Length | 252 bp |
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| Protein Length | 83 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646482381 |
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| Product | ribosomal protein L29 |
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| Protein accession | YP_003373519 |
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| Protein GI | 283782765 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0255] Ribosomal protein L29 |
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| TIGRFAM ID | [TIGR00012] ribosomal protein L29 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAGTCG GAACTGCAGA CTACACCATC AAGAATTTGA ACGAGAAGAC AAATGCTGAG
ATTGAAGGCT TCTTGAAGAA GTCTAAGGAA GAGCTATTTA ACTTGCGCTT CCAGGCAGCA
ACTGGTCAAC TCGAAAACAG CGCTCGCCTC AAGGCGGTCA AGCACGACAT TGCCAGGATG
TATACTATCC TGCGTGAGCG TGAACTCGGC ATCAGCCAAG AGCCTGGCGC CACTGAGGTC
AAGGAGAAGT AA
|
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| Protein sequence | MPVGTADYTI KNLNEKTNAE IEGFLKKSKE ELFNLRFQAA TGQLENSARL KAVKHDIARM
YTILRERELG ISQEPGATEV KEK
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