Gene HMPREF0424_0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0253 
SymbolrpsI 
ID8709406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand+ 
Start bp279610 
End bp280098 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content52% 
IMG OID646482372 
Productribosomal protein S9 
Protein accessionYP_003373510 
Protein GI283782756 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAA ATAACAACTC CGCGGTTCTT GAGAACGAAG AAGAACTGAC TAGCTACACC 
ACTGAAACCA ATGCTGGTGC AGGCACTGGT ACTTCCGCCA TCGAGCCAGG CTACGGCACT 
GGTCGTCGTA AGGAAGCTGT TGCTCGCGTG CGTTTGGTTC CTGGCTCCGG TAAGTGGACT 
ATCAATGGTC GCACTTTGGA GGAGTACTTC CCATCTCGTT TGTTGCAACG CGAAGTGAAT 
TCACCAATCG TGTTGCTCAA GCTTGAAGGC AAGTTTGATG TTGTAGTCCT CGTTGACGGT 
GGTGGTACCA CTGGTCAAGC TGGTGCTATT CGTTTGGGTG TTGCTCGTGC ATTGAATGCT 
ATCGATCGCG ATGCAAACCG TGTTGCTTTG AAGAAGGCTG GCTTCTTGAC TCGTGACGCT 
CGCGTTGTGG AACGCAAGAA GGCTGGTTTG CACAAGGCAC GTCGTGCACC TCAGTTCTCG 
AAGCGTTAA
 
Protein sequence
MAENNNSAVL ENEEELTSYT TETNAGAGTG TSAIEPGYGT GRRKEAVARV RLVPGSGKWT 
INGRTLEEYF PSRLLQREVN SPIVLLKLEG KFDVVVLVDG GGTTGQAGAI RLGVARALNA 
IDRDANRVAL KKAGFLTRDA RVVERKKAGL HKARRAPQFS KR