Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0248 |
Symbol | |
ID | 8709372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | + |
Start bp | 275085 |
End bp | 275378 |
Gene Length | 294 bp |
Protein Length | 97 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 646482367 |
Product | hypothetical protein |
Protein accession | YP_003373505 |
Protein GI | 283782751 |
COG category | [S] Function unknown |
COG ID | [COG1937] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATT ATGATATTGA TAAAGAAAAA CTGATAGTAC GCATGCATCG AGTACAAGGT CAGCTTGCAG CAGTCAATAC TATGATTGAA AACGATGCGA AGTGTCAAGA TGTTCTTATG CAGCTTTCCG CTGCAACTGC TGCTTTACAT TCTTTAGCAG TGATAGTGGC AAGGGAACAT GTCAATAAAG AAATACATGA ATCTGTAAAA ATTGGTACCG AAGAAGGTGC CGATGCAGCA ATGGAAGATA TTTCTGGTAT CATTGACAGG TTATTGCGTT ACGAAAAAGC GTAG
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Protein sequence | MKNYDIDKEK LIVRMHRVQG QLAAVNTMIE NDAKCQDVLM QLSAATAALH SLAVIVAREH VNKEIHESVK IGTEEGADAA MEDISGIIDR LLRYEKA
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