| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0243 |
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| Symbol | |
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| ID | 8709998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 269194 |
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| End bp | 270423 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646482362 |
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| Product | ImpB/MucB/SamB family protein |
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| Protein accession | YP_003373501 |
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| Protein GI | 283782747 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCAT TTTATGCTTC TTTAGAAGTT GCAAGACACC CGGAGCTTAA AGGAAAGCCG
CTTATTATCG GCACAGGCAA TCGCGCTGTT GTTTCTGCAG CAAGCTACGA AGCGCGCGCT
TACGGCGTTA ATTCCGCTAT GCCCGTTGTT AAAGCTAGAA ATCTTTGTCC ACAAGGAATT
TTCTTGCCAG TTGACATTCC TTACTATTCA AGCGTTTCCA AAAGTATTTT TGAAAATATT
TTTTTGCATA TTACTAATCA AGTTGAAAAA GTTTCTGTTG ACGAATGCTA TATGAATGTT
AAATCGGCTT TATTACAGTG GAAATCGCCT GTAAATATTG GAACTTGGGT ACGAAAAGAA
GTATTTGAAA AGTATCATAT TACATGCTCG GTTGGCATTG CCAGCAATAA ACTTATTGCA
AAGATGGCTT CAACTAATGC AAAACCTAAT GGAATGCTTC TTATTCCGCA AAAATGTAAT
GAAGATTTTG TGTCAATAAT GCCCTTGCGC GCAATACCAG GAATTGGCTC ATCTTTAATA
CATAAGCTTG AGGATTGGGG CTTATCTACT GTTGCGTCGC TTAAAAATGT TGACGAAGCA
ACGCTTACTC GCATAACGGG TTCGCAAATC TTAGCAAGAA TGATATATCA ATCAGTTAGG
GGCATAGACG AGCGCACTGT GACTGCACAT GCCCCTGAAA AATCCATTGG AACTGAGCGA
ACTCTTGATA CAGATACCAC GAACGAGAAT GCTGTTAAAC AATTACTACA GCAATGCTGC
AGCGAAGTAA CTCAACAGTT GCGAAACAGA AAACTTATGG CACGCACTAT AACGTTAAAA
CTACGCTTTG GCGACTTGCA TTATGTTACT AGATCTTCTA CTTTGCAAAA CGCAACTGAT
TCAACACACG AGTTTTACGA GCATGTCGTT GTTTTGCTTT CTAGAGCTAA TCCAACTGTG
CATAATTACA TTCTTGGAGG CAATAACACA AAGCTTTTAA GCCCAGTTCG TTTAGCTGGT
GTTACAGCGA ATAATCTTGT GCCAGCAAAC AAAGTTTCAC TTCAGCCTTC TCTAAACGAT
ATTCTGGAGG AAAATACTCG CGAATCTAAA AATCCTACAC AAAACATCAT GTCCACAATG
AATAAAAATA CTAGATTGCG TCACGCAGAA CACGCTTTAG ATGCCGTTCG CAAAAAATAC
GGCAACAACG CTGCCCACAT TGGATTGTAA
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| Protein sequence | MDAFYASLEV ARHPELKGKP LIIGTGNRAV VSAASYEARA YGVNSAMPVV KARNLCPQGI
FLPVDIPYYS SVSKSIFENI FLHITNQVEK VSVDECYMNV KSALLQWKSP VNIGTWVRKE
VFEKYHITCS VGIASNKLIA KMASTNAKPN GMLLIPQKCN EDFVSIMPLR AIPGIGSSLI
HKLEDWGLST VASLKNVDEA TLTRITGSQI LARMIYQSVR GIDERTVTAH APEKSIGTER
TLDTDTTNEN AVKQLLQQCC SEVTQQLRNR KLMARTITLK LRFGDLHYVT RSSTLQNATD
STHEFYEHVV VLLSRANPTV HNYILGGNNT KLLSPVRLAG VTANNLVPAN KVSLQPSLND
ILEENTRESK NPTQNIMSTM NKNTRLRHAE HALDAVRKKY GNNAAHIGL
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