Gene HMPREF0424_0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0242 
Symbol 
ID8709600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand
Start bp268827 
End bp269159 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content47% 
IMG OID646482361 
Productputative ferredoxin 1 
Protein accessionYP_003373500 
Protein GI283782746 
COG category[C] Energy production and conversion 
COG ID[COG1146] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATATG TAATCGCAGA GCCTTGTGTT GATGTAAAAG ACAAAGCGTG TGTAGATGAA 
TGCCCTGTAG ACTGCATTTA TGAAGGCGAT CGAACGCTTT ATATTAACCC AAACGAGTGT
GTGGATTGTG GAGCTTGTGA ACCGGCTTGC CCAGTAGAAG CTATTTTTTA TGAAGATGAT
TTGCCAGATG GCTGGGAGTG GTATCGCGAT GCTGCGGTTG ATTATTTCGA CAAGCTCGGG
GATTTGGGAG GAGCTACAGA TGCTGGAGCT TCCGGATGGG ATGAAGCTCG CGTTGCGGCA
TTGCCTCCGC GTTCAGATAA AGCAAGTAAT TAA
 
Protein sequence
MPYVIAEPCV DVKDKACVDE CPVDCIYEGD RTLYINPNEC VDCGACEPAC PVEAIFYEDD 
LPDGWEWYRD AAVDYFDKLG DLGGATDAGA SGWDEARVAA LPPRSDKASN