Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0242 |
Symbol | |
ID | 8709600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | + |
Start bp | 268827 |
End bp | 269159 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646482361 |
Product | putative ferredoxin 1 |
Protein accession | YP_003373500 |
Protein GI | 283782746 |
COG category | [C] Energy production and conversion |
COG ID | [COG1146] Ferredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATATG TAATCGCAGA GCCTTGTGTT GATGTAAAAG ACAAAGCGTG TGTAGATGAA TGCCCTGTAG ACTGCATTTA TGAAGGCGAT CGAACGCTTT ATATTAACCC AAACGAGTGT GTGGATTGTG GAGCTTGTGA ACCGGCTTGC CCAGTAGAAG CTATTTTTTA TGAAGATGAT TTGCCAGATG GCTGGGAGTG GTATCGCGAT GCTGCGGTTG ATTATTTCGA CAAGCTCGGG GATTTGGGAG GAGCTACAGA TGCTGGAGCT TCCGGATGGG ATGAAGCTCG CGTTGCGGCA TTGCCTCCGC GTTCAGATAA AGCAAGTAAT TAA
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Protein sequence | MPYVIAEPCV DVKDKACVDE CPVDCIYEGD RTLYINPNEC VDCGACEPAC PVEAIFYEDD LPDGWEWYRD AAVDYFDKLG DLGGATDAGA SGWDEARVAA LPPRSDKASN
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