| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0240 |
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| Symbol | |
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| ID | 8709403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 265511 |
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| End bp | 266782 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646482359 |
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| Product | UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain protein |
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| Protein accession | YP_003373498 |
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| Protein GI | 283782744 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0812] UDP-N-acetylmuramate dehydrogenase |
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| TIGRFAM ID | [TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATGC AAGCATCTTT AGTAAATAAT CCATCCTTTG CAGATATAAC AACTGTTGGC
GTAGGTGGCA AAATTGCGCG TTTTATAGAG CCAAAAAGTC GCGTTGCTGT TATTGAAGCG
GTAGAAGATG CTGATGAGCT TGGTCTGCCT TTATGCGTTA TCGGTGGCGG CTCTAATATG
CTTGTTAGCG ATGAGAACTT CAATGGTGTT GTTGTGCGAG ATGCTAGACG TGATATTCAT
GTGCTTGATG AAGCAGCACC TTCAGAAGAT GGCATTGATT TGCAAAGTGG TGCTCATTTA
GTGCATATCA ATGCTGAAGC TGGTTGTAAT TGGGATGATT TTGTTTCCCA TACGATTTCT
CTTGGCTTAG AGGGTGTAGA AGGTCTTTCT GGCATACCTG GCACTGTTGG GGCTTCTGTT
GTGCAAAATA TTGGCGCTTA TGGTCAAGAA GTATCTCAAA GTGTTACTTC CGTAGAAGTC
TGGGACCGCA AAACAAAATC AACTATGGAG TTGCAGAAGG ATGCTTTAAA TTTTGGGTAT
CGCACTTCAT TGCTTAAAAA AAGCATGTAC TCTTCAGTAG GAGTTCCTGC GGACTCGTAT
TTTCCTACTC CTCGTTACGT TGTGCTGTCT GTTACTTTTT GTTTGAAACA TAATTCAACC
GGCATTGTCT CTCATTCGCA ATTAGCTAAT GCTTTGCACG TAGAATTGGG TGAGCGCATG
CAAACAGCAG CAATACGTCG TGAAGTTTTG CGCGTTCGTG CCTCTAAAGG CATGCTTGAG
GATGCTTCTC GTTACGATAA GCTGTGGATG CGTGGTACAA AGTGTGCTGA AGGTGTTGAA
TTTGCTTTGC GATTGCAAAG TGAAGACTAT GTTACTGGCG AATTTTTAGA GGGCGATAAT
ATTTACAGTG ATCGTCATAG TTGCGGTAGT TTCTTTATGA ATCCAATACT TAGTACTAGT
GAAGCCGATA CTTTGCCAGA AGATGCTCCT AAATTTGATG CAATTATGCA AGATGGATCG
CATGGTATAA AAACTTCTGC AGCTTGGCTT ATTGACCATG CTGGATTCCA TAAGGGTTTT
AGGCTTATAG AAAATGGGAA ACCTTCGCCT GCGGGGCTTT CTTCATTGCA TACTTTGGCA
CTTACCAATC GTAATAATGC TTCTTGTGAC GATATTGCAA ATTTGGCAAA AACTATTATC
CGTGGTGTGC AAAGTAAGTT TGGTGTAACG CTTATTCCTG AACCTGTTGT AATAAATATT
TCTATAAACT GA
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| Protein sequence | MSMQASLVNN PSFADITTVG VGGKIARFIE PKSRVAVIEA VEDADELGLP LCVIGGGSNM
LVSDENFNGV VVRDARRDIH VLDEAAPSED GIDLQSGAHL VHINAEAGCN WDDFVSHTIS
LGLEGVEGLS GIPGTVGASV VQNIGAYGQE VSQSVTSVEV WDRKTKSTME LQKDALNFGY
RTSLLKKSMY SSVGVPADSY FPTPRYVVLS VTFCLKHNST GIVSHSQLAN ALHVELGERM
QTAAIRREVL RVRASKGMLE DASRYDKLWM RGTKCAEGVE FALRLQSEDY VTGEFLEGDN
IYSDRHSCGS FFMNPILSTS EADTLPEDAP KFDAIMQDGS HGIKTSAAWL IDHAGFHKGF
RLIENGKPSP AGLSSLHTLA LTNRNNASCD DIANLAKTII RGVQSKFGVT LIPEPVVINI
SIN
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