| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0224 |
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| Symbol | pstB |
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| ID | 8709045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 250464 |
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| End bp | 251243 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646482343 |
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| Product | phosphate ABC transporter, ATP-binding protein |
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| Protein accession | YP_003373485 |
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| Protein GI | 283782731 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1117] ABC-type phosphate transport system, ATPase component |
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| TIGRFAM ID | [TIGR00972] phosphate ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCAAC GAATTGATGT GAAGCATCTT AATATTTACT ATGGTGATTT TCTTGCTGTA
GAAGATGTGA ATATTAATAT TGAGCCAAAT AAAGTGACGG CTTTTATCGG ACCTTCCGGA
TGCGGAAAAT CAACAGTTTT GCGCACTTTA GACCGCATGC ACGAAATCAC TCCTGGCGCG
CGAGTAGAAG GTCAAGTGCT TCTTGAAGGC CGCGATTTAT ACGGTAAAGA CGTGGATCCT
GTGGCTGTCC GCCGCGATGT TGGCATGGTT TTCCAGCGTC CAAATCCTTT CCCAACAATG
TCTATTCGAG AAAACGTGCT CGCTGGAGTT CGTTTGAATA ATCGCAAAAT TGCTAAGAGT
GATGCTGACG ATTTAGTTGA GTGGGCTTTA CGAGGCGCGA ACTTGTGGAA TGAAGTTAAG
GATCGCTTAG ATAAGCCGGG TATTGGTCTT TCTGGCGGTC AGCAGCAGCG ACTTTGCATT
GCTAGGGCTG TGGCTGTGCA TCCGCAAGTT TTACTTATGG ACGAGCCTTG CTCAGCTCTT
GACCCTATTT CTACGTTGGC TGTAGAAGAT TTGATTAATG AGCTTAAGCG TGACTACACG
ATTGTGATCG TGACGCATAA TATGCAACAG GCTGCGCGTG TTGCGGATTA CACGGCATTC
TTTAATTTGA AAGCTGTAGG TCAACCTGGT CATCTGGAAT ACTTTGCAGA CACAACTACT
ATGTTCAACA ATCCGCGCAA TGCTGAAGCT GAGCGTTATA TTTCCGGTCG TTTTGGCTGA
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| Protein sequence | MGQRIDVKHL NIYYGDFLAV EDVNINIEPN KVTAFIGPSG CGKSTVLRTL DRMHEITPGA
RVEGQVLLEG RDLYGKDVDP VAVRRDVGMV FQRPNPFPTM SIRENVLAGV RLNNRKIAKS
DADDLVEWAL RGANLWNEVK DRLDKPGIGL SGGQQQRLCI ARAVAVHPQV LLMDEPCSAL
DPISTLAVED LINELKRDYT IVIVTHNMQQ AARVADYTAF FNLKAVGQPG HLEYFADTTT
MFNNPRNAEA ERYISGRFG
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