| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0223 |
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| Symbol | pstA |
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| ID | 8709154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 249358 |
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| End bp | 250395 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646482342 |
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| Product | phosphate ABC transporter, permease protein PstA |
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| Protein accession | YP_003373484 |
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| Protein GI | 283782730 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0581] ABC-type phosphate transport system, permease component |
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| TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCATC AAATTAATAA ATCTAACGAA GGTGCTGAAG TCTTCGCAGA AAATTGCGTA
GAAAATCGCG CAGAAAATTC TGCGGCTCCG GTTATTGACT TCAACAAATT CCGCCCAACT
CGCTCACACA TAGCTGCGCG CAAACGTAAA GACATGCTTA TGCGCGTGCT GATTTTCTTG
TCTTTTGTTG TGGCACTTAT TCCGCTTATT TCTTTGCTTT TAACAACCAT TATCAATGGT
ATTAAGCGTT TAAATTTTGA TTTTCTCACT CATAACATGA CTTACGTTGT GGGCGGAAAT
GCTACTGGAA CTGGCGGTTA CGGCGGAATT TTGCACGCGA TTATTGGAAC TCTTGAAATA
ACGCTAGGAG CTATGGTTAT TTCAATCCCG ATTGGTTTAA TGTGTGCTGT TTATTTGGTT
GAGTATGCTC GCGGAAACAA AATTTCGCGC ATAATTAATC TGCTTGTTGA CGTTATGAGT
GGTATTCCGT CTATTGTTGC TGGATTGTTT GCATTTTCTA TGTTTGCTCT TCTTGCTGGT
CCTGGCACAA TCAATGGTTT TGAAGGATCT GTGGCTCTTT CACTTCTTAT GATTCCAACA
GTTGTGAAGT CTTCTCAAGA AATGCTAAAA ATCGTGCCTA ACGATTTGCG CGAGGCGTCT
CTTGCTTTGG GAGTTACTCA GCAGCGCACA ATTACAAAAA TCGTTTTGCG CACTGCTCTT
CCGGGAATTG TGTCTGGCTG TATTCTTGCG GTTGCGCGCG TTATTGGCGA AACTGCACCA
CTTCTTATGG CTTCAGGCTT TATTGCTTCC ACGAATCTCA ATTTATTTGA TGGGCAAATG
ACGACTTTGC CGGTGTACGT TTACCAAGAA TATTCCAAAC TTTCTGCGAA TTGTCCAGCT
AATGCGCCGG CTTCTTGCGT AACGTCAATT CCAATGGAGC GCTCGTGGGC TGCAGCTTTA
ACGCTTATTG TGTTGGTGTT GTTGCTAAAT ATTTTGGGGC GAGTTGTAGC TCGAGTGTTT
TCTGTAAAGG CGAAATAA
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| Protein sequence | MEHQINKSNE GAEVFAENCV ENRAENSAAP VIDFNKFRPT RSHIAARKRK DMLMRVLIFL
SFVVALIPLI SLLLTTIING IKRLNFDFLT HNMTYVVGGN ATGTGGYGGI LHAIIGTLEI
TLGAMVISIP IGLMCAVYLV EYARGNKISR IINLLVDVMS GIPSIVAGLF AFSMFALLAG
PGTINGFEGS VALSLLMIPT VVKSSQEMLK IVPNDLREAS LALGVTQQRT ITKIVLRTAL
PGIVSGCILA VARVIGETAP LLMASGFIAS TNLNLFDGQM TTLPVYVYQE YSKLSANCPA
NAPASCVTSI PMERSWAAAL TLIVLVLLLN ILGRVVARVF SVKAK
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