| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0221 |
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| Symbol | pstS |
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| ID | 8709542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 247077 |
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| End bp | 248303 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646482340 |
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| Product | phosphate ABC transporter, phosphate-binding protein PstS |
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| Protein accession | YP_003373482 |
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| Protein GI | 283782728 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00975] phosphate ABC transporter, phosphate-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGTGGG GCGCAAGGCA ATTCTTCGCG AAAGGAAAGA AGAATATGCG TAACGATATG
AATAAGTCAA ATATGAATAA ATTTAATACG ACTAAAAGCG CACTTAAGTT CCGCAGTATT
GCTGCGGCGG CGCTAACTTT CGGCTTGTGT GCAACCTGCT CTGCTTGCGG AGACAATGTT
CCTGCTGATA ATTCCAATGC GTCAGGTTCG CAAAACACTA AGATCTCCGG CAATTTCCAA
GGCTCGGGTG CTTCTTCCCA GCAGGTTGCA ATGGAAGCGT GGATTGCAGG ATTCCAATCT
AAAAATCCGG GTGCAAAAAT TGCTTACAAT CCTACTGGTT CTGGTGCTGG CGTTACCACT
TTTATGACTG GTGCCACGGC TTGGGCTGGT TCAGACAAAG CATTGAGTAA CGACGAAGTT
GAAAAGTCTA AGTCGGTTTG TGCTCATGGA ACTACGGCTT TCGATGTGCC TGTGTATGTT
TCACCAATTG CGATTATTTT CAACCTTAAA GGTGTTTCGG ATGCTGGCAA GCATATTAAT
TTGGACGCTT CGACGATTGC TAAAATTTTC GACGGAAAAA TTACGCGCTG GAATGATGAG
GATATCAAGA AACAGAATCC TAAGCTAAAG CTTCCAGACA CCCCGATTAC TGTTGTTCAC
CGCTCCGATA AGTCCGGTAC AACGCAGAAT TTCTTAAGCT ACGTGAAGGA TGCAGCTCCG
GACGATTGGA AATATGATCT TTCTGAAAAC TGGCCGAATA GTGTCGGTCA AGGTGCAAAG
GGCACTTCGG GCGTTGTATC TACTATTCGC ATGGCAAATG GTGCGATTGG TTACGCTGAT
TTTTCACAGG TCGGTAAGCT CGGTACTGTT GCAGTGAAGG TGGGGGATAC TTACAATGAG
ATTTCTCCGG AAGCTGCTTC TAAAACTTTA GCTGATTCTG AAATTGACGC AGACGCTTCT
GCAAAATATC CTAATCGCGT TGTTATGAAA ATTAATCACA ATACGCAATC TAAGGGTGCT
TATCCAATTG TGTTAGTTTC TTACGATATT GCTTGCCCGG TTTATAAAGA TGCTGGAACT
GCTCGATTTG TGAAGTCTTG GCTTAGCTAC GTAACTAGCG CGGAAGGGCA GAATGCTGCT
TCTTCTGCTG CTGGAACGGC TCCACTTCCA CAAAATTTGG TAAGCAAAAT TAACGCATCG
ATTAAGTCTG TTAAAACAGG AAAGTAA
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| Protein sequence | MWWGARQFFA KGKKNMRNDM NKSNMNKFNT TKSALKFRSI AAAALTFGLC ATCSACGDNV
PADNSNASGS QNTKISGNFQ GSGASSQQVA MEAWIAGFQS KNPGAKIAYN PTGSGAGVTT
FMTGATAWAG SDKALSNDEV EKSKSVCAHG TTAFDVPVYV SPIAIIFNLK GVSDAGKHIN
LDASTIAKIF DGKITRWNDE DIKKQNPKLK LPDTPITVVH RSDKSGTTQN FLSYVKDAAP
DDWKYDLSEN WPNSVGQGAK GTSGVVSTIR MANGAIGYAD FSQVGKLGTV AVKVGDTYNE
ISPEAASKTL ADSEIDADAS AKYPNRVVMK INHNTQSKGA YPIVLVSYDI ACPVYKDAGT
ARFVKSWLSY VTSAEGQNAA SSAAGTAPLP QNLVSKINAS IKSVKTGK
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