| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0215 |
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| Symbol | |
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| ID | 8709338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 240164 |
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| End bp | 241129 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646482334 |
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| Product | uncharacterized protein, YfiH family |
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| Protein accession | YP_003373476 |
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| Protein GI | 283782722 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1496] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGAAA CAAGCGTAAC TGGTATGCCA TTGCCTCACG AAGATGAGGA CGGTACGCCA
ATTCCTGTAA CCATTCCAGT GCCGTTAGGG TCTCGCACTC ATGCAGTTTT TACTACTAGA
CTGGGTGGAA TTTCTGAAGG TTCATTTGCT TCACTTAATT TAGGCGGACG CGCAGGAGAT
AGTGAGGAGG CTGTAGCAAG CAATCGCGCA GCTTTACAGA AAGCTTTGCA AGCAGACTTG
TCGCTTGTTG CTCAAGTTCA TAGCAGAGAA GTATTTGACG CAGATAGTGT AGTAGATTCA
TGGAATACTT CTTACGGCTT TGATGCAACA GGTTTTGCAG ATTCGCAATT GAGAATTGAG
GCGGATGCGC AAGTTTCAAC TGCGTGCTCG CTTGCTTTAG GAATGTTTGC GGCAGATTGT
TTGCCAGTTT TACTTGCGGA CGACGAAGCT GGAGTAATCG CTGCAGCGCA TTGTGGGCGA
AAAGGATTGA TGGCTGGCGT ACTCGATGCT GTCATCGAAG CAATGTGCGA AAAGGGAGCT
GAGCGTTCTC GTATAGAAGC AGTGCTCGGT CCGTGTATTT GTGGAGATTG CTACGAAGTT
GGTGAGAGTA TTGCGCGCGA TTTTGAAAAA CGTTATCCGC AAACTGTAAC AAAAACGCGT
TTCGGTGGAA TTGGTATTGA TATTGCTGAA GCTGCACGCA TTGATTTAGC GATCGCAGGA
GTTGCGAATA TTGTTGACGC TTTGCCAAGA GTTACTGCAG CTACGCAATA TTTGCAGGAA
GATGAGGAAT TGCGCACGAT TTGCGAAGTA GATGGGGAAG GCGAGTCTTT GCCGGAACGT
TTGCAAAATT TGCAAAACCC AATGTGCACT TTGGAAAATC CGCTATGGTA TTCTCATCGA
CGTGCTAGTT TAGCTGGAAA ATCGCATGAA GGTAGACTTC TTGCTTTAGT AATTCGCGAC
AAATAA
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| Protein sequence | MQETSVTGMP LPHEDEDGTP IPVTIPVPLG SRTHAVFTTR LGGISEGSFA SLNLGGRAGD
SEEAVASNRA ALQKALQADL SLVAQVHSRE VFDADSVVDS WNTSYGFDAT GFADSQLRIE
ADAQVSTACS LALGMFAADC LPVLLADDEA GVIAAAHCGR KGLMAGVLDA VIEAMCEKGA
ERSRIEAVLG PCICGDCYEV GESIARDFEK RYPQTVTKTR FGGIGIDIAE AARIDLAIAG
VANIVDALPR VTAATQYLQE DEELRTICEV DGEGESLPER LQNLQNPMCT LENPLWYSHR
RASLAGKSHE GRLLALVIRD K
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