| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0201 |
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| Symbol | gltX |
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| ID | 8709566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 223905 |
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| End bp | 225458 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646482320 |
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| Product | glutamate--tRNA ligase |
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| Protein accession | YP_003373465 |
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| Protein GI | 283782711 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATA TCGAGGAAAC TCAAGAAGTT GCTAATAATG CAACAAAATC CGCAAAGCCT
GAACTTCCAA AGAATGTTCG CGTGCGTTTT TGCCCTTCTC CAACCGGCAC ACCTCACGTG
GGTATGGTTC GTACCGCGTT GTTTAATTGG GCGGAGGCTC GCCATACTCA CGGCAAATTG
CTGTTCCGTA TTGAAGATAC CGATAATGAG CGCGATAGTG AGGAAAGCTA CCAGCAGATT
ATTGAGGCTC TTCGTTGGCT CAATATTGAT TGGGACGAGG GCATTGATGT TGGCGGAGAT
AACGGACCGT ATCGCCAGTC CCAGCGCATG GAAATTTATA AAGACGTAGC ACAAAAGCTT
TTTGAAGCAG GATACGCTTA TGAATCCTTC TCTACTCCTG AAGAAATTAA GGAGCGTAAT
ATTGCTGCTG GCCGTCCTGC TGAATTTGGT TACGATGGCT ACGATCGCAA TCTTACGGAA
GAACAGAAGC AAGCTTTCCG CGACGAAGGT CGCAAACCTG CACTTCGCTT GAAGATGCCA
AATGAAGACA TTACTTTTAA CGATTTAATT CGTGGTGAAA TTACTTTTAA AGCCGGATCT
GTTCCAGATT ATGTGATTGT GCGTCCGAAT GGCGATCCAC TTTATACGCT TACGAACCCT
GTTGACGATG CGTTAATGGA TGTGAATGTG GTTTTGCGCG GTGAGGATAT TTTGAGCTCC
ACACCTCGTC AGATTGTGCT GTACCGTTAC CTTATGGAGA TGGGTATTGC TAAGGAAACT
CCGCTTTACG GACATATGCC TTACGTTATG GGCGAAGGTA AGAAGAAGCT TTCTAAGAGA
GACCCTGAGT CCAACTTGTT CTTGCATAGG GATAACGGAT TTATTCCAGA AGGCTTGCTG
AATTACTTGG CTTTGCTTGG ATGGTCTATT GCGCCTGATC GTGACGTGTT CACTATGGAC
GAGATGGTTG AAAAGTTCGA TGTGCGCGAC GTTAAGGCAA ATCCTGCACA CTTTGACTTG
GATAAAGCAA TTTCGATTAA CGCTGAGCAT ATTCGCATGC TTGAGCCTCA AGATTTCTTG
AACCGTTCTG TGCCTTACTT GCATAAGGAT GGCGTAGTTA GTGCGGATAA TTGGGATGCG
TTAACTGACC GCGAGCGTGA AGTACTCACC GCTGCTGCAC CTCTTGTACA GTCTCGTGTG
CGCTTGCTTG GTGAGGTCGC TGGAATGGTT GGCAGCCTGT TAAGTGAAGA TGGCTACATT
GCTCCAGATG ACGACGCTCG TAAGCAGTTG AAGGAATCTG CAGGAGAGGT TCTTGACGCT
GCGCTCGCTG CCTTGAAGGA CGTTGATGCT TCTGATTGGC ATACTGATTC CTTGCACGAG
CTTTTGAACA AGAAGCTTGT TGAGGAAGCT GGCTACAAGC CGCGCTTGGC GTTTGGCCCT
GTGCGAGTTG CACTTTCTGG TCGTCGCGTT TCGCCTCCAC TGTTTGAGTC CATGGAAATC
GTGGGCAAAG ACGTGACTTT GGCGCGTTTG GCTGGTTTGC GCGAGCATTT GTAA
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| Protein sequence | MTDIEETQEV ANNATKSAKP ELPKNVRVRF CPSPTGTPHV GMVRTALFNW AEARHTHGKL
LFRIEDTDNE RDSEESYQQI IEALRWLNID WDEGIDVGGD NGPYRQSQRM EIYKDVAQKL
FEAGYAYESF STPEEIKERN IAAGRPAEFG YDGYDRNLTE EQKQAFRDEG RKPALRLKMP
NEDITFNDLI RGEITFKAGS VPDYVIVRPN GDPLYTLTNP VDDALMDVNV VLRGEDILSS
TPRQIVLYRY LMEMGIAKET PLYGHMPYVM GEGKKKLSKR DPESNLFLHR DNGFIPEGLL
NYLALLGWSI APDRDVFTMD EMVEKFDVRD VKANPAHFDL DKAISINAEH IRMLEPQDFL
NRSVPYLHKD GVVSADNWDA LTDREREVLT AAAPLVQSRV RLLGEVAGMV GSLLSEDGYI
APDDDARKQL KESAGEVLDA ALAALKDVDA SDWHTDSLHE LLNKKLVEEA GYKPRLAFGP
VRVALSGRRV SPPLFESMEI VGKDVTLARL AGLREHL
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