Gene HMPREF0424_0199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0199 
Symbol 
ID8709368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand+ 
Start bp222150 
End bp222842 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content45% 
IMG OID646482318 
Productphosphoglycerate mutase family protein 
Protein accessionYP_003373463 
Protein GI283782709 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCTA CGACAATTCA TTTTGTGCGT CATGGAGAAG TTGATAATCC AAATCACGTG 
TTGTATGAGC GTCTTTCTGG ATTTCATCTT TCTGCTCGCG GAGTGAGAAT GGCGCAAGCT 
ACAGCAAAAT ATATTGCCAC TGTTCCGCAA ATGCGCGGAA TTACTGCAAT TTATTCGTCT 
CCTCTTGAGC GAACACGTGA AACAGCGCGT GAAATCGAAA ATGCTTTGCG CAATATTGCA 
GATTCTGCCT ATGTAAAAGC GCACTGTGAC GAAGATTCTG CGCAATCTCA AGAAAGCGAC 
ATTATTTTAG ATAAACGCTT AATTGAAGCT GGAAATAATT TCCGCGGGAA ACGCATAGGT 
TACGGTGAAG GCGCACTGTG GAAAAACAAC AATTGGAAGC TTGTTGCGAA TTTGTGGAAG 
CCAAGTTGGG GAGAAAGCTA CAGAAGTATC GCCGCTAGAG TTGGCGATTT TGTGCGCGAG 
CAGGTTCGTA AGCATCCGGG TGAGCAAATC GTTGCAGTTA CTCATGAGTC GCCAATCTGG 
TCTTATAGAC ACCTACTGGA AACCGGCCAC GCTGAACATA ATATGCTTCT TCGTCACACG 
GCTTTAGCTT CGATTACTTC TATTACTTAC GATTGCGAGA CTTTGCGTGT GCTTTCAATT 
ACGTATGTTG ATCCTGCTGG GCGAGTGAAG TAA
 
Protein sequence
MPATTIHFVR HGEVDNPNHV LYERLSGFHL SARGVRMAQA TAKYIATVPQ MRGITAIYSS 
PLERTRETAR EIENALRNIA DSAYVKAHCD EDSAQSQESD IILDKRLIEA GNNFRGKRIG 
YGEGALWKNN NWKLVANLWK PSWGESYRSI AARVGDFVRE QVRKHPGEQI VAVTHESPIW 
SYRHLLETGH AEHNMLLRHT ALASITSITY DCETLRVLSI TYVDPAGRVK