| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0165 |
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| Symbol | |
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| ID | 8708891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 187686 |
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| End bp | 188531 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646482284 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_003373429 |
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| Protein GI | 283782675 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAGA ATATAGAAAA TAAGTTAGAT AGCGCGGAGT CTAAGCCAAA AATGCTGTTG
ACGTTGGATC ATATTTCCAA GATTTACGGA TCTCTTCGAG CTGTTGACGA TTTGTCGCTT
ACTGTGCCAG AAGGCGAGTG GCTTTCTATT GTTGGCTCCA GTGGTTCTGG CAAAACAACG
TTAATGAACA TTATTGGCTG CATGGATTCA CCATCCAAAG GTTCCGTGTC TTTGCAAGGT
CGCAAACTTG AGGATTTGAA TGCCGGTCAA CTCGCTGACG TTCGTAAAAA CGTAATCGGT
TTAGTTTTTC AAAAGTTTTA TCTTGTTCCG CATTTAACGG CAGTTGAAAA CGTGATGGTT
GCGCAATACT ATCATTCTGT TGTTGACGAA GCTCAAGCAA TGGACGCTTT GGATCGCGTG
GGCTTGAAGG ATCGCGCTCA CCATCTGCCA AGCCAGCTTT CTGGTGGCGA GCAGCAGCGT
GTGTGCGTTG CTCGTGCGCT TATCAACTGC CCTAAGTTGC TTCTTGCGGA TGAGCCGACT
GGTAATTTGG ACGAAAAAAA TGAGCAGATT GTGCTCGATT TGTTTAAGCA GCTGCACAAT
CAAGGCACTA CGATTATTGT TGTAACTCAT GATTCTTTGG TAGCTCAATG CGCGGATCGC
GAAATTATGC TCAACCACGG TGTGCTTGTT GGTGAGCGTT GGAATAACGA GGATGCTCGC
AAAGCGTACG AGGCGATTGG CGGCAAGCCT GCATTTACGA GTGCTCACGT TGATGAAAGT
GTTGTGGAAG CTTTGCAAGA CCATGAGCCT ACTAAGTCGC CTAAATTAGC GAATTTAGAT
GATTAG
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| Protein sequence | MTENIENKLD SAESKPKMLL TLDHISKIYG SLRAVDDLSL TVPEGEWLSI VGSSGSGKTT
LMNIIGCMDS PSKGSVSLQG RKLEDLNAGQ LADVRKNVIG LVFQKFYLVP HLTAVENVMV
AQYYHSVVDE AQAMDALDRV GLKDRAHHLP SQLSGGEQQR VCVARALINC PKLLLADEPT
GNLDEKNEQI VLDLFKQLHN QGTTIIVVTH DSLVAQCADR EIMLNHGVLV GERWNNEDAR
KAYEAIGGKP AFTSAHVDES VVEALQDHEP TKSPKLANLD D
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