| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0155 |
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| Symbol | |
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| ID | 8709313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 177083 |
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| End bp | 177784 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 646482274 |
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| Product | response regulator receiver domain protein |
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| Protein accession | YP_003373419 |
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| Protein GI | 283782665 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.37446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGA ATGATTATTT ATTGAACAAG CATCTGCTGC TTGTTGACGA TGAGCAGGGA
CTTCTAGATA TGGTCGTGTC CATATTAAAC GAATACGGTT TTTATAATAT AACGACTGCA
AAAAGTATAA AAGATGCCAT AGAAGCAACA CAAAAATTAC GTCCAGAATT AGCAATCCTT
GATGTTATGC TCCCCGACGG TAATGGGTTT GAGCTAATGA AGCAGATAAA ACAATATAGT
GATTGTCCTA TTTTATTCCT TACTGCTTGC GGTGAAGATG AAGATAAGTT TAAGGGATTT
GGCTTAGGAG CAGACGATTA TATTGTAAAA CCGTTTCTTC CAAAAGAGCT AACGTTTCGC
ATTATGGCAA TTTTAAGACG AAGCTACAAG AGCGAAAATC CCATTGTTAA ACTGAAAAAT
AGTCAGATTG ATTTTTCTTC TGCCCAAGTA ATAAAAAATA ACGAACATAT TCAACTCACA
GCCAAAGAAT ATGATTTACT TTCTGCACTT TATAGAAATG CTGGATGCAT TGTAACAATT
GACGCGTTAT GTGAAGCTAC ATGGGGAGCT AATCCTTTTG GATATGAAAA TTCTTTAATG
GCACATATAC GTCGTATCAG AGAAAAAATA GAACTCAATC CATCGCAGCC TGTTTCTTTA
ATAACAGTTA AAGGCTTAGG ATATAAGCTG ATTGTGGAGT AA
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| Protein sequence | MNLNDYLLNK HLLLVDDEQG LLDMVVSILN EYGFYNITTA KSIKDAIEAT QKLRPELAIL
DVMLPDGNGF ELMKQIKQYS DCPILFLTAC GEDEDKFKGF GLGADDYIVK PFLPKELTFR
IMAILRRSYK SENPIVKLKN SQIDFSSAQV IKNNEHIQLT AKEYDLLSAL YRNAGCIVTI
DALCEATWGA NPFGYENSLM AHIRRIREKI ELNPSQPVSL ITVKGLGYKL IVE
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