| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0141 |
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| Symbol | metA |
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| ID | 8710042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 162847 |
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| End bp | 163878 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646482260 |
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| Product | homoserine O-succinyltransferase |
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| Protein accession | YP_003373405 |
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| Protein GI | 283782651 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1897] Homoserine trans-succinylase |
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| TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.711356 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTATTA AGATTCCTGA AGGATTGCCA GCGCGAAGCA TATTAGATGC TGAGCGAATT
TTTGCATTGG AACGCCCAGA AGCAGAACAG CAGGATGTTC GACCACTTCG TTTGTTGATT
TTGAATCTTA TGCCCAAAAA AATCGAGACA GAAACTCAGC TTTTGAGACT CATCTCTAAG
TCTCCTTTGC AAGTCGACGT CGATTTTATG AAAACTTCTA CGCATGTATC AACGCATGTT
AGCGCTGATC ATTTAGTAAA ATTCTATGAA AATCTTGACG CACTTCGTAA CAACTATTAC
GACGGATTTG TTGTGACGGG AGCTCCTGTT GAGCATATGG AATTTGAAGA TGTCGACTAC
TGGCACGAAT TTACGCAAAT TCTTGACTGG GCATCAACAC ACGTTTTCTC AACAATGTAT
TTGTGCTGGG GTGCAATGGG TGCGCTTTAC TATCGATATG GCGTAAAAAA GCATGTTCTC
AGCAAAAAAG TTTTTGGTGT GTTCCCGCAA TATTTGCAGG ATGAGTACTG TTTTCTTACA
AATGGTTTTG ATGAAATCGC TTTACAACCG CATTCTAGAA TAGCGAGTGT TGATGTTGAC
AGCATTTCTG CAGATCAGCG TTTACAAATT CTTACGTATG GTCCCGAATC TGGTCCGGGC
TTAGTTGCTA CGCGTGATTT TTCTGAAGTT TTTGCGCTAG GACACTGGGA ATATGGCAAA
ATGACTCTTG CGCAGGAATA TGAGCGTGAC ATGTTAAAAG GTTTGAGCAA CGTTCCATTT
CCTTACAACT ATTTCCCTCA TGACGATCCA AAATTAGAGC CATTATTTTC TTGGCGCGCG
CACGCGAATT TGCTTTGGCG CAACTGGCTT AATTGGGTGT ACGAAACTAC GCCTTACAAT
CTTTCTGATA TTCCTCATTT AAGAACTGCT GGAAGGCTTG GAACTGAACG TTCTATAAGA
CATGAGCCAG CTTCTCCGCG CTCCGATAAT TTTTATCCAT TTGACGGAGT TAAGTACGGT
ATGAATAAAT AA
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| Protein sequence | MPIKIPEGLP ARSILDAERI FALERPEAEQ QDVRPLRLLI LNLMPKKIET ETQLLRLISK
SPLQVDVDFM KTSTHVSTHV SADHLVKFYE NLDALRNNYY DGFVVTGAPV EHMEFEDVDY
WHEFTQILDW ASTHVFSTMY LCWGAMGALY YRYGVKKHVL SKKVFGVFPQ YLQDEYCFLT
NGFDEIALQP HSRIASVDVD SISADQRLQI LTYGPESGPG LVATRDFSEV FALGHWEYGK
MTLAQEYERD MLKGLSNVPF PYNYFPHDDP KLEPLFSWRA HANLLWRNWL NWVYETTPYN
LSDIPHLRTA GRLGTERSIR HEPASPRSDN FYPFDGVKYG MNK
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