| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0135 |
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| Symbol | |
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| ID | 8709801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 156737 |
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| End bp | 157444 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646482254 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373400 |
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| Protein GI | 283782646 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1637] Predicted nuclease of the RecB family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.823284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGAATTA TTGTTGCAGA TTGCAGTGCA GAGTATACAG GTAGGTTAAA TGCCACGCTT
CCTTTAGCTA AGCGAGTGTT GCTTATTAAA GCAGATGGCA GCGTACTTAT TTTTTCTGAG
CTTGGTGCGT ATAAACCTCT TAATTGGATG GTAGCTCCTT GTAGTATGCG TGTTTTACGT
AAAGAAGATA GCGGCGAATC CGATGCTGGC GTTGTTGTAG ATGGCTGTAT TTTGCGTGTT
GCTGCCGCTA AAAGCGATGA TTTGCTTATG ATTTCGCTCG AGCATGTTTA TAGCGATAAT
ACTTACGATT TGGGTGAGGA TCCTGGCTTA ATTAAAGATG GTGTTGAGGA TCATTTGCAA
CGTTACTTGG CTGAGCAGAT TGAACGAATC GGCGATGGTG CAACGTTGGT GCGCCGTGAG
TATCCTACGG CTATCGGCCC AGTGGATATT ATGGCTCAGG ACGCGGATGG TGTACATGTC
GCTATTGAGA TTAAGCGGCA TGGCGGTATC GACGGCGTTG AACAACTTAC GCGTTATTGT
GAGTTACTGA ATAGAGATCC GTTACTTAAG CCGGTTAGAG GTATTTTTGC TGCGCAAACT
ATTAGCCCAC AAGCTCGCGT TTTGGCTGAG GATCGTGGAT TTACTTGCTT AATATTGGAT
TACGATGAAA TGCGTGGAGT CGAGTCCAAC GATCTTCGTC TGTTCTAA
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| Protein sequence | MRIIVADCSA EYTGRLNATL PLAKRVLLIK ADGSVLIFSE LGAYKPLNWM VAPCSMRVLR
KEDSGESDAG VVVDGCILRV AAAKSDDLLM ISLEHVYSDN TYDLGEDPGL IKDGVEDHLQ
RYLAEQIERI GDGATLVRRE YPTAIGPVDI MAQDADGVHV AIEIKRHGGI DGVEQLTRYC
ELLNRDPLLK PVRGIFAAQT ISPQARVLAE DRGFTCLILD YDEMRGVESN DLRLF
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