Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0131 |
Symbol | |
ID | 8708901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | + |
Start bp | 150831 |
End bp | 151451 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 646482250 |
Product | hypothetical protein |
Protein accession | YP_003373396 |
Protein GI | 283782642 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAATAG CATCTGAAGA AATACAGCAG CAACTCGATC GTATAGTGGC ACTTGGGTAT CCAGATGTGG CTGATATGAG TGCCGATGCT TTTCGTAAGT TGGCAAATCC TATATTGTGT GCGCTTGAAA ATAGTAGTTT AGGTGCGAAT ATTTTATTGG TTCCTACGCG TGAATTAGTT TCGCCTGAAT CGTTGATTTC TCGTACGAGT ATTAATCGTA TGGCTGGATT CACCACTATG CCTCCGCGAG ATATCATAAG TTTTCTTCCC AAAGACGGGT ATGAGTTTCC TAAAGGCCCG TTCTATATAG TCGTCGATCC ACATACTGGC TCATCGTATT TGAATCGAGA GCCTGATGTC GCTCGTAAGC TTATTGATTC TGATGAACGT TTGCCTCTTA CTCTTGAGGA AGGGCTTGCT ATTGCAACAC AGCATCCAGA TTGGCTTGAA AGCAAGAATG GATTTAATTT GCTTGGTTCG CAAAGCGCAG ATGGGCGTGT GCCAAGTATA TGGATGAGTC AGTGTGCTCC GCGTTTAGGT GCTGTTTGGC CAAATTCTCG TCATACTTGG CTTGGTAATG CATATTGCAT GGAAAGATGT GGAGTGTCGT CGCTGAAGTA A
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Protein sequence | MSIASEEIQQ QLDRIVALGY PDVADMSADA FRKLANPILC ALENSSLGAN ILLVPTRELV SPESLISRTS INRMAGFTTM PPRDIISFLP KDGYEFPKGP FYIVVDPHTG SSYLNREPDV ARKLIDSDER LPLTLEEGLA IATQHPDWLE SKNGFNLLGS QSADGRVPSI WMSQCAPRLG AVWPNSRHTW LGNAYCMERC GVSSLK
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