Gene HMPREF0424_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0123 
Symbol 
ID8709351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand
Start bp143884 
End bp144162 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content37% 
IMG OID646482244 
Producthypothetical protein 
Protein accessionYP_003373390 
Protein GI283782636 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGTTG GGATAATGCA AAAACTTGTT GCACGATGCT CTGTGTCTAT GCTTCAAGTA 
AATGAACAAT TAGTGAATAT TGAGTCATGT TTGTGTCAAA AAAGAAAATT GTACGCTGAC
GGTCTTAAAA ATAAGGATTC TGGAGCTGTA ACAGCTGAAT ATGCAGTAGT TATTATTGCT
GCCACTGGTT TTGCTGCACT GCTAGTTGCT ATTTTGAAAT CAGATACGGT TCGCACAACG
TTGACAGATT TAGTTAAAAA AGCATTGAAA ATCGGCTAA
 
Protein sequence
MMVGIMQKLV ARCSVSMLQV NEQLVNIESC LCQKRKLYAD GLKNKDSGAV TAEYAVVIIA 
ATGFAALLVA ILKSDTVRTT LTDLVKKALK IG