Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0107 |
Symbol | |
ID | 8708900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | + |
Start bp | 127462 |
End bp | 128370 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 646482228 |
Product | acetyltransferase, GNAT family |
Protein accession | YP_003373374 |
Protein GI | 283782620 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACAAA CCAATGATGG TGTTATTAAC TCTCGCGAGT TACCAAAATC TATAGTAATT CCTCAAATTC GTGGAGAGAT GGCGCACCTT CGTCCAGCTA CGTGCAATGA TTTGCAAAGA ATGGATGATT TGTGCGCATT TGATGGTGCT GCAGTTATTA CTGGAAAGGA TGCTAATTCA GAGCGTTCTA TGGTTCATTC GTGGGTTGAA AGCTCTATGC AATGGACTAA AGATAGTCTT ATTGGCGAAA ATCCTTCTGA ATCTTGTCGT TTTGCTGGCG ATGTTCAATT GCGTCACACT ATTGCGTGGG CGATTGTTCC TGATGTTTTG GATGATTCAA ATAACGCTTC CGGCGACATT ATTGGCATGA TTTTCCTTAT AGATATTGAC GGATGGTCTC GCAGTGCTCG AATTCAAGTT GTTTTAGGCA AAAATTATCG AGGAAGAGGC TATTCGCGCG ATGCGATGCC TAGAGTGATG ACTTATGCTT TTGCATCAGA GCCGACTGGT CTAGGGTTGC ATAGAATTTG GGTGGGAGTT CCGGCAACTA ATACTCGTTC GCTTTCGGTG TATCAATCGC TTGGCTTTGT AAAAACAGGC ACTGCGCGCG ATGCATTATG GGATGCCCAG AATCAAAAAT ATCAAGATTT TGTTGTAATG GACACTCTTG TAGATGAATA TGATGCTATT CGCTCGCTAG ATGCTTTTGG GTTACACGTT ATTGAAGAAA ATCCTGGTGT AATTGAAGCT TTGAGTGCGC ATGAACATTC TGTGGCTATA CCTGTGCATC GTGATAATCT TGATGAAGCA TGGCCGTACA ATGTAAACGT CTCTGAAGGA AGTTCATCAA AAAAAGCTTG GTGGCGCATT ATAGGTCGTG GACGCAAACG TAATACGGAA GGTAAGTAA
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Protein sequence | MQQTNDGVIN SRELPKSIVI PQIRGEMAHL RPATCNDLQR MDDLCAFDGA AVITGKDANS ERSMVHSWVE SSMQWTKDSL IGENPSESCR FAGDVQLRHT IAWAIVPDVL DDSNNASGDI IGMIFLIDID GWSRSARIQV VLGKNYRGRG YSRDAMPRVM TYAFASEPTG LGLHRIWVGV PATNTRSLSV YQSLGFVKTG TARDALWDAQ NQKYQDFVVM DTLVDEYDAI RSLDAFGLHV IEENPGVIEA LSAHEHSVAI PVHRDNLDEA WPYNVNVSEG SSSKKAWWRI IGRGRKRNTE GK
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