| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0091 |
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| Symbol | |
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| ID | 8709724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 108151 |
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| End bp | 108858 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 646482212 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373358 |
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| Protein GI | 283782604 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3863] Uncharacterized distant relative of cell wall-associated hydrolases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00203716 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAAGA AACTTTTTAA AACAATTACA ATTGCAGCTG TTTTATGCGT ACTATGGCCT
ACATCTTCCG CTTTTGCCAA AGAATCATAT GATGATAAAT TATCAGATTT TGCAAATGCG
TTACCCTATT ACGTAAATAA AGAAAAGCTA GATAAAAGCG TGCAAGAAAT AGCTCAATAT
CATCATTGGA GCAAAGAAAA AGCGCTCGAT GCAGAAATGG AATTATTGCA AAATCCAAAT
ATCAATAAAT ACCAACAAGA TAAATCTTCC AGCCAAACAA CTATAACGCT ACCAAACGCT
CAACATCGTG GTGATTTTTA TTTCACTCCT GCAGGACTAC ATGGTCACAC AGGCATTTAC
TCGCAAAAAA ATAAAATTGT TGAGGCAGTA GGACCAGGAG AAGTAGCTAG AGAAAAACTA
GCTTTCAAGA CTCTTGTAGC TCCAGGAGCA ATAATACGTT CTGTTAATAC ATCTAATGCC
AATAGAGCAA AAGCTGCAGA TCGAGCTCGA ACTTATATCG GTCGTGGATA TAATAGTGCT
TTCTTCCAAC CGCATAAAAA CGACTGGGGA GGACTACATT GCGCGCAATT AGTCTGGGCT
TCTTATAAAT ATGGCGCTGG AATAGACATT GACGATGGCA ACGATGAACT CGTCTGGCCT
TGGGATCTTG AAAAAACAAC AAAAGCCACA ACATACAGAA AGCTTTGA
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| Protein sequence | MNKKLFKTIT IAAVLCVLWP TSSAFAKESY DDKLSDFANA LPYYVNKEKL DKSVQEIAQY
HHWSKEKALD AEMELLQNPN INKYQQDKSS SQTTITLPNA QHRGDFYFTP AGLHGHTGIY
SQKNKIVEAV GPGEVAREKL AFKTLVAPGA IIRSVNTSNA NRAKAADRAR TYIGRGYNSA
FFQPHKNDWG GLHCAQLVWA SYKYGAGIDI DDGNDELVWP WDLEKTTKAT TYRKL
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