| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0090 |
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| Symbol | |
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| ID | 8709022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 106875 |
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| End bp | 108143 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 646482211 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373357 |
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| Protein GI | 283782603 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00255156 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACAAT TAAGCAAGAA GATAATTATT GTTTTACTGT GCTTTTCTGC CACCGTCATC
GCATCAGCTA TATTGTTTCT ACTGTTTTGG CAGCAGATGC CTACACAAAT TAGTTATAAA
CAAGCAAATC TTTCACATGC CGTTGGCGCT GTGGCAATAA GTGACATGAC TGCCGGCAAA
GAGAAGAAGC GAGATGGATT CATCGTATTA CTCAACAACG ATGGAACTTC TCAAACTATT
ACTACTTCTG CCATTGAATC TCCTAACATA TTATGGAACA CTGATGGTTT GTATTTCGTA
GACGCTAAAT TTGACTATTT CCTTGCCCAA AAAAGTAACA TGCGTATTGC AATTAAACAT
CATAAAAAAT TACCTGCTGC ACAAGCTGGA ATTTTTGAAA ATAATCAGCA CGAAGTTATT
AGTGTTCTTG ACCACGGTTT TACTCGCACT AGGAAAAATC AACTCGAATT CAATAGTATT
ACCCTTGGCA AACCGCGAAA TACAGATATT ATGCAATCAC GTATATATGA TGTATCGAGC
GCTTGCGAGA GTGGCACGTA CACCATTAGC CCCAGCGACA ATGGGACTAA TAGTTTTAAT
GGAACAAATG GATTCGTAAT AAAAAAACTC CAAGATTCAA TACCCGTAAA ACATATACTC
AAAGATTCTG AAACGACGGT ACATAGTTTT TCTACGATAG GAAACGACAC AGCTCCTTGC
ATTCGCAACA CCATCATTTC GATTGGAGAC ACAACGGAAT ATAAAAAAGA CGATCCTGAA
TTCACTTTCA CCACGTACGG TATTAATCGG TGGAATACGC AATCAGGAAA ATTCGATTTT
ATACCGCTAA CCTTGCAAAA TAAGCGCATA GCCTATAACT ATGGGGAAAA ACACGATTTT
GAAAATATTT CATATGGGAA TAGGACAATG CTCAATGATC GCGAGCTCTT AGCACTCGAC
CAAGGCACAG GCGCGCTGTA TAAAATTAAT ACAATTACTG GGAAAACGCA AATTACATTT
ACCATCCCAG TAAATACTTC AAGCAAGTTC AATCCAAAAA GATATTGGAT GCAAACCACT
AAAAATGCTA TAGCAATTTT AGATAACGCA AATGGAGAAA AGACACCACA ATCTACATTG
TATTTTCTTA ACAAAAAGAA TTTTAAACTA CAACAAACCG TGCATTTTGA TAACACAACA
AGTAATCTTC TTGCTGGGAA AGTAGATGGA TGTCATTTCA GCGATTTTGC AATTAATCCA
CAAATGTAG
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| Protein sequence | MKQLSKKIII VLLCFSATVI ASAILFLLFW QQMPTQISYK QANLSHAVGA VAISDMTAGK
EKKRDGFIVL LNNDGTSQTI TTSAIESPNI LWNTDGLYFV DAKFDYFLAQ KSNMRIAIKH
HKKLPAAQAG IFENNQHEVI SVLDHGFTRT RKNQLEFNSI TLGKPRNTDI MQSRIYDVSS
ACESGTYTIS PSDNGTNSFN GTNGFVIKKL QDSIPVKHIL KDSETTVHSF STIGNDTAPC
IRNTIISIGD TTEYKKDDPE FTFTTYGINR WNTQSGKFDF IPLTLQNKRI AYNYGEKHDF
ENISYGNRTM LNDRELLALD QGTGALYKIN TITGKTQITF TIPVNTSSKF NPKRYWMQTT
KNAIAILDNA NGEKTPQSTL YFLNKKNFKL QQTVHFDNTT SNLLAGKVDG CHFSDFAINP
QM
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