Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0081 |
Symbol | |
ID | 8709563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | - |
Start bp | 95386 |
End bp | 96582 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646482202 |
Product | hydrolase, NUDIX family |
Protein accession | YP_003373348 |
Protein GI | 283782594 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0406] Fructose-2,6-bisphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000209436 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAGTGCAG TAACGACGCA ATACGTTGAA GCAGCTGGCG GAATTATTTA TCGCAAGCGC AATACTACAA ACAGCTCAAA TGCAGATGAA GAGACAAAAA CAGACAGCAA TGCAATAAAT CCAAACCATG CAAATAAGCC AATCAGCGCA ATAAAGTCTA GCGACGACGA TTTTGAGCTT TGCCTAGTCT ACCGTCCTAA ATATGACGAT TGGAGCTGGC CAAAAGGAAA GAATGAGCCA AACGAATCGC ATCGCCACAC AGCCGTGCGC GAAGTTGGAG AAGAAACAGG ATATTCAGTC ACGCTAGGTC CACACATTGC CAAAATAGAG TATCCGCTTG AGCGCGAAGG CAAAAAGTCT TCCAAGAACA GCTCATCAAA TAACAGCCAA AATCGCAATT CCCAGCCGGA AGTAATAAAG CGAATCCACT ACTGGATGAT GCGCTTAATC GACAAGCCAA CTGCAGCAAA GCGTCTCCCT GCTTTCGGAC CAATTAAGCC AGCAAAACCT ACTGAAATTG GCAATGTTTT ATGGCTTACT CCTTCTCAAG CGCGAAAAAA GCTTACGCAC GATAGCGACC GTGAAGTGCT AGACGCTTTC TTAGAAAAGC TCCACGCAGG TAAAGCAGAA TACAGCACGT TGCTTCTAGT GCGTCACGGA AAAGCTGAGT CTCGAAAAAC TTGGCAAGGA AGCGAAGCGA CTCGACCAAT CACACCTCTT GGAGCAGCCG CATCATACGC TTTAGGCCGT GAGCTTGCCT GCTACGCGCC GAATAAGATC ATATCGTCAC CTTGGAAGCG TTGCGTTGAA ACGGTTGCGG CTTTTGCACA CGACTCTTCA CTTTCTATAG AGCAGGTTGC GGAACTTACT GAAGACCATC ACGAGAAACA ACCAAAATCT ACATTGTCTG TGCTTATAAA CGAAATACAA AATCTTGAGT GCCACACACA AAATACAAGC GAAACTAGCA ATGCAAGCAC AACTAACAAC GCAACCGTCA TATGCTTGCA CCGACCGGTT ATTGGCACTT TCTTTGATTA TTTGCGCGAA ATAACAAAAC CTAGAGCACA CAAGCGCATA TTCAGTCAAA AATCTCCATA TATGCCTACA GGAAGCGCAA TAGTTTTGCA CATAATTAGT ACTCCTAAAG GCGCTCGCAT TATTGATATT GAAAAGGTTC TTCCAAGTGT CTACTAG
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Protein sequence | MSAVTTQYVE AAGGIIYRKR NTTNSSNADE ETKTDSNAIN PNHANKPISA IKSSDDDFEL CLVYRPKYDD WSWPKGKNEP NESHRHTAVR EVGEETGYSV TLGPHIAKIE YPLEREGKKS SKNSSSNNSQ NRNSQPEVIK RIHYWMMRLI DKPTAAKRLP AFGPIKPAKP TEIGNVLWLT PSQARKKLTH DSDREVLDAF LEKLHAGKAE YSTLLLVRHG KAESRKTWQG SEATRPITPL GAAASYALGR ELACYAPNKI ISSPWKRCVE TVAAFAHDSS LSIEQVAELT EDHHEKQPKS TLSVLINEIQ NLECHTQNTS ETSNASTTNN ATVICLHRPV IGTFFDYLRE ITKPRAHKRI FSQKSPYMPT GSAIVLHIIS TPKGARIIDI EKVLPSVY
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