| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0078 |
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| Symbol | |
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| ID | 8709128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 93164 |
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| End bp | 93583 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646482199 |
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| Product | toxin-antitoxin system, antitoxin component, HicB family |
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| Protein accession | YP_003373345 |
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| Protein GI | 283782591 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1598] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000322202 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATTAG CGTATCCTGT TATTCTTACT CCATACGAAG ATAATAGTGG GGGTTTTGTT
GCAGAAGTTC CTGATTTGCC AGGGTGTGTA ACTGGCGGTA GTAATCTTGC AGATGCTTTG
ATTATGGCAG AAGACGCAGC AAGCGGATGG GTTCTTACAG AACTAGAAAG TGGCAAGACT
GCGCCAAAAG CTAGCGATAT TAATGATATT GTTGTAGAAA ATCCTAATTC AAAGTTATCT
ATGGTTGCGC TTGATATGGA TTCTTATGCT GCAAAATACG GTTCTCAGTC AGTTCGCAAA
AATGTTACTC TTCCAGCTTG GCTTGACACT TGGGCGCAAA AAGCTGGCAT CAGCTACAGT
GGGACTTTAC GCGATGCTTT AGAATCTTTA TATGCTAAAG GAGCTGTGAA TAAAGCTTAG
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| Protein sequence | MKLAYPVILT PYEDNSGGFV AEVPDLPGCV TGGSNLADAL IMAEDAASGW VLTELESGKT
APKASDINDI VVENPNSKLS MVALDMDSYA AKYGSQSVRK NVTLPAWLDT WAQKAGISYS
GTLRDALESL YAKGAVNKA
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