| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0077 |
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| Symbol | |
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| ID | 8709900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 92092 |
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| End bp | 92886 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646482198 |
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| Product | CobB/CobQ-like protein |
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| Protein accession | YP_003373344 |
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| Protein GI | 283782590 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3442] Predicted glutamine amidotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000405616 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGGTT CCAGTGATAT TAGTAAAGCA AATGCTACTT TTGAAGAAAA TCGCGTGCTA
GATATTGTGT CGTTGTACCC GAAAGACATG AATATTTACG GGGACTACGG GAATGTGCTT
ACAATTATGC GCCGAGCGGA ATTGTATGGC TACGAGCCTG TGCTACGCGA GTACAATGTT
GGCGATTTAT GGCCAGAACA CGTGGATATG ATTCTTGGTG GCGGTGGTCA AGATCATGGT
CAAAGTAGAG TCACTGAAGA TTTATTTGCG CGAGCAGACG CGATTCGTGG GCTTGCAAAA
GATGGCGTTC CAATGCTTAT GATTTGTGGT CTTTACCAGC TTTTTGGAGA GTATTTTGAA
ACCGTTGATG GTCAAAAGCT TAAAGGAATT GAAATACTTG GCGAGCATAC GGTTGGTCAA
GACGTGCGCA TGATTGGAAA TCTTGTGGAG CATAGTGCCG ATTTTGGCGA TATTGTGGGA
TACGAGAACC ATTCTGGGCG CACAAGCTTG GAAGATGGCA CGCTGCCACT TGGCTCGGTT
GATAGTGAAA ATTGCGGTAA CAATGGCAAA GATCACACGG AAGGAGCGCG CAAATACAAT
GTTATTGGAA CGTATATGCA CGGCTCAGTT TTGCCGAAAA ATCCGCGTCT GGCTGACTTT
TTAATTCGTA CCGCTGCACA AAATCGTTAC GGCGAATTTT CGCCCAAGCG AACTGATGCC
CAGCGCGCGG AGCTTGCGAA ACTAGACGAA TTAGCAGAGC GCGCTCGCAA AGTGGCCGTA
ACTCGTCCGC GGTAA
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| Protein sequence | MNGSSDISKA NATFEENRVL DIVSLYPKDM NIYGDYGNVL TIMRRAELYG YEPVLREYNV
GDLWPEHVDM ILGGGGQDHG QSRVTEDLFA RADAIRGLAK DGVPMLMICG LYQLFGEYFE
TVDGQKLKGI EILGEHTVGQ DVRMIGNLVE HSADFGDIVG YENHSGRTSL EDGTLPLGSV
DSENCGNNGK DHTEGARKYN VIGTYMHGSV LPKNPRLADF LIRTAAQNRY GEFSPKRTDA
QRAELAKLDE LAERARKVAV TRPR
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