| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0073 |
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| Symbol | |
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| ID | 8709175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 85566 |
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| End bp | 87344 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646482194 |
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| Product | ammonium Transporter Family |
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| Protein accession | YP_003373340 |
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| Protein GI | 283782586 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00320699 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCACAA TGGATCCGCA ATGGGCATTG TTGGCTGGCG CGTTGGTGTT TATTATTACG
CCGGGTATTG CCCTGTTCTA TGGAGGCCGT GAACGCGCTA CTTCCATGGT GAATATGATG
ATGCTTTCAG CTGGCGCTAT TGCTGTAACC ACACTGGTTT GGACGCTGTG GGGATGGTCG
TTAGCTTTTG CTGGCAAAGA TATGGCTGGT GGTGTTATAG GTGATCCATT GAGTGGTTTG
CTATTCCGTG ATTCGATGGT GGCAGATCAT GGTGTGTTTA CGTCTATGGA CGCAAATTCC
GGATTATCTG GCGGCATTCC TGCAGCTTTT CGTTTAGCAT GTGCTGTTGT TGCAGTAGCG
CTTATTACTG GAGCTCTAGC CGGTCGAGTG CGTTACGCTA TTTGGCTTAT TTTCGTAGCT
GTGTGGATTA CTTTAGTATT CGCTCCATTA GCACATATGG TGTGCGGTGG TGGATTGCTT
TCGCCTAATG GTGCTATTTC ACAGGCGTTA GGTATTTCAG TGCATGACTT CGCGGGTGGC
TCTATATTGC ATATTGCTGC GGCTGTTTCG GCTTTTGCAA TTGTTATGAT TATTGGCGGA
CATGCTCACT TCCCTCTTAA GCGTTTTGTT TTGCATATTA AGAATGTTGC GCATACGAGT
GGCAATGCTA ATTCTGGAGC TACTAATTCG CGTAATCCTA AAAGTCGTTT ATCGCGCGCA
TTGTGGGCTG ATGTTGAGCA TGCTAAAAAT GCTGCTAGTG AGACTGTTGT CTCTCCAGTT
GCTACAGTGA CTGAGGTTGC TGCTGAATCC ACTGCAACGC AGTCAGCCGT TGAAAATGGT
GTTGCTGCTC GCCATCCGCA TAATGTTCCT TTCGTTATGC TTGGCGTTTT CTTGATTTGG
TTCGGTTGGC TTGGGTTAAT GATTGGTTCT TCTGCAGGCG TTCCTGGAGT TGCAGGTTAT
GCTTGGGTGA GTTCCACAAT AACTGCTTCT GCTTCAATGC TTGCCTGGGG TGTGACTGAA
CGTTTACACT CTGGATGCTT TACTGCTTTG GGAGCTGCGT CTGGTGTTAT GGCTGGATTG
GCTGCAAGTG CTGCAGCCGC GGATGTTATT GCTCCATTGT GGGCTTTAGT TTTGGGTGTT
CTTTCTGGTG TTATTACTTC TCTAGTGACT CACTCTCGTA CTTTTGTGCG CTACGATGGT
GCCTTGCATG TAGTTAGCGT GAATGGTGTT GCTGCGCTTA TTGGTGTGCT TGCAGTAGGC
TTATTTGCTG ATGGTTCTGG ATTACTTGCT GTTGGTGATT GGCATCAGTT AGTTGCACAA
CTGTGCTTAA TTGGGATTAC GGTGCTTTAT GCAGGTGCTG TAACTGCAGT ATTAGCTTTT
GTTCTTGAAA AGCTTTTTGG ATGGCGTATT TCGGAAGCTA AGGAACGTAA GGGCGTTGAT
TTGGTTGATC AAGGAGAGCG TGCTTACGAT TTTTCTTCTA TTGCACAAAG TCATGATGGC
GCTGTAGTTG CTGTTGCAGA TGATGATGCA AATAAAACTC AAATGGCTGT TCTTACTTCT
GTTGATATTG ATATGGGTGA AAACGAGGTT GAACAATCTG ATTTTATGGT TAATCAATCT
GAGGCAAATC CTGAGCAAGG CGATTCTGAG GTTGATTCTA AATCTGAAGT TGAGCAAAAA
GAGTCTTCTT CTGAAGAAGA GTTTGAAACT GTAAAAAAAG ATGAATCATC GCAAAAGAAT
AAAAAAACAG AAAAACGAAA TAATAGTGCT AAAGAATAG
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| Protein sequence | MTTMDPQWAL LAGALVFIIT PGIALFYGGR ERATSMVNMM MLSAGAIAVT TLVWTLWGWS
LAFAGKDMAG GVIGDPLSGL LFRDSMVADH GVFTSMDANS GLSGGIPAAF RLACAVVAVA
LITGALAGRV RYAIWLIFVA VWITLVFAPL AHMVCGGGLL SPNGAISQAL GISVHDFAGG
SILHIAAAVS AFAIVMIIGG HAHFPLKRFV LHIKNVAHTS GNANSGATNS RNPKSRLSRA
LWADVEHAKN AASETVVSPV ATVTEVAAES TATQSAVENG VAARHPHNVP FVMLGVFLIW
FGWLGLMIGS SAGVPGVAGY AWVSSTITAS ASMLAWGVTE RLHSGCFTAL GAASGVMAGL
AASAAAADVI APLWALVLGV LSGVITSLVT HSRTFVRYDG ALHVVSVNGV AALIGVLAVG
LFADGSGLLA VGDWHQLVAQ LCLIGITVLY AGAVTAVLAF VLEKLFGWRI SEAKERKGVD
LVDQGERAYD FSSIAQSHDG AVVAVADDDA NKTQMAVLTS VDIDMGENEV EQSDFMVNQS
EANPEQGDSE VDSKSEVEQK ESSSEEEFET VKKDESSQKN KKTEKRNNSA KE
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