| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0072 |
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| Symbol | ftsY |
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| ID | 8709073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 84222 |
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| End bp | 85403 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646482193 |
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| Product | signal recognition particle-docking protein FtsY |
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| Protein accession | YP_003373339 |
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| Protein GI | 283782585 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00248407 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATATGG TTATGGATAT GAACATGCTA ATTTGGTTTG CGGCTGCGGC TGTTGTTATT
GTCATCTTAT TAGTAACAGT TGCAGTGATT TTGCGCATTC ACAGCAATAG TCATGGACCA
GTAATTCCTG AAAGCGTTGA TAGTGCAATC GATACAAGCA AAAATAAAGC GCGTGGAACA
AAAAAATCTG AAAAACAGAT AGAAAGTAAC GTCGCTGTTG TACCTAATGA AGAAGTAAAG
TCTGAATTAT TGCCAGAAAG TACTTCTTCG CGTATTAAAC GTCTTCGCGG ACGTTTGGCT
CATAGTGCAA ATCCATTTGG TCGTGCATTG TTTAATATCA TAAGCAAGGA TCATCTTTCG
GAAGAAGATT GGGAAGATGT AGAAGATACT CTTCTTATGG CCGATGTTGG TTCTCGAGCT
AGTGAAGAAT TAGTAGAAGA TCTACGCAAA GATGCACGCA TTGCTGGTAC CTCTAATTCA
GAAGATGTGC ATTCAGCATT GCGTACAAAA CTATTGAAAA TAGTAGATGA AGACGCTGAT
CGACGCTTAA ATGTAGATAA ATCAGATGCG CATCATCCTA GCGTTATTAT GATGGTCGGC
GTTAATGGCA CCGGTAAAAC CACTACTGCT GGTAAATTAG CGCGATTGTT TATTGCCAAA
AAACGTTCAG TAATGTTTGC TGCAGCAGAT ACTTTTCGTG CGGCTGCAGC TGATCAACTT
GAAACTTGGG CGTCTGCAGT AAGCGTGCCA GTTGTTCGTG CAAATAAAGA TGGTGCTGAT
CCTGCTTCTG TTGCTTTTAT TGCTGCGAAT AAGGCAAAAG AAGAGCAAAC TGATTTATTG
ATTGTAGATA CTGCTGGTCG TTTGCAGAAT AAAGCAAATT TAATGGAAGA GCTTGGCAAA
ATTCGTAGGG TTATAGAAAA AACTATGCCT GTTGATGAAG TATTGCTGGT ATTGGATGCT
ACTACTGGTC AAAATGGCAT GTCTCAAGCA AAAGTATTTG CTGAAGCTAT TGGCATTACG
GGCGTAGTTC TTACTAAGCT TGATGGTTCC GCTAAAGGTG GAATTGTTAT AGCTGTACAG
CGTGAACTTG GTGTACCGGT TAAGCTAGTA GGTCTTGGCG AAGGACCAGA TGATTTAGTG
CCGTTTGATG CTCAAAGCTT CGTAGACGGT TTGCTCGCTT AA
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| Protein sequence | MNMVMDMNML IWFAAAAVVI VILLVTVAVI LRIHSNSHGP VIPESVDSAI DTSKNKARGT
KKSEKQIESN VAVVPNEEVK SELLPESTSS RIKRLRGRLA HSANPFGRAL FNIISKDHLS
EEDWEDVEDT LLMADVGSRA SEELVEDLRK DARIAGTSNS EDVHSALRTK LLKIVDEDAD
RRLNVDKSDA HHPSVIMMVG VNGTGKTTTA GKLARLFIAK KRSVMFAAAD TFRAAAADQL
ETWASAVSVP VVRANKDGAD PASVAFIAAN KAKEEQTDLL IVDTAGRLQN KANLMEELGK
IRRVIEKTMP VDEVLLVLDA TTGQNGMSQA KVFAEAIGIT GVVLTKLDGS AKGGIVIAVQ
RELGVPVKLV GLGEGPDDLV PFDAQSFVDG LLA
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