Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0071 |
Symbol | |
ID | 8710069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | - |
Start bp | 83773 |
End bp | 84033 |
Gene Length | 261 bp |
Protein Length | 86 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 646482192 |
Product | glutaredoxin |
Protein accession | YP_003373338 |
Protein GI | 283782584 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0695] Glutaredoxin and related proteins |
TIGRFAM ID | [TIGR02200] Glutaredoxin-like protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00875586 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCAGATC AGCCTACCGT AAATGTATAC GGTGCAGATT GGTGTGGAGA TTGCAAACGT GCGAAAGCTG CGCTAATCCA GTATGGTGTG GCATTCGTTT GGCACGATAT TGAAACAGAA GAGGGTGCTG AAGAAAAAGC GATTGAAATT AGCAATCAAA AGCATATTCC AGTTGTTACT TTTGCAGATA ATACTTTTAT GGTTGAGCCA TCAGCAACAC AAATAAAAGC AAAACTTGAG TCACTCGGAA TACTGCAATA A
|
Protein sequence | MSDQPTVNVY GADWCGDCKR AKAALIQYGV AFVWHDIETE EGAEEKAIEI SNQKHIPVVT FADNTFMVEP SATQIKAKLE SLGILQ
|
| |