| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0065 |
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| Symbol | |
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| ID | 8710078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 76444 |
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| End bp | 78285 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646482186 |
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| Product | kinase domain protein |
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| Protein accession | YP_003373333 |
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| Protein GI | 283782579 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0464349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGATA CAAGCATGTT CGATTTGCAA CCAGGGACTA ATGTAGGCGG ATACACGCTT
ATTTCTAGGC TTGGCGGCGG CGCAATGGGG TCAGTTTGGC GCGTTAATGA CGATGGCGGC
AATCAATATG CTATGAAAAT ATTACGTGCT TCTGTTCATG CAAAACAGAG TGAAGATGAA
GATTCTGAGC AGGAACGTGC TCGAATACGT TTAAAACGTG AAGCTTTGGC TTTGCAGAGG
ATTCATCATC CAGGTGTTTG CGCGATAGTG GATATGGAAT TAGATGCTTC AATCGCTTTT
ATTGTGACAG AGTTGATTGA AGGACATAAT TTGCGCGAAG ACGTGGATGA GAATGGACCT
TATATTGCAG ATGATTTGGA GCGTCTTGCG CATAAGCTTA TTGAAGCTGT TAAAGCAGTT
CATGAAGCCG GTATTGTTCA TCGCGATATT AAACCAACTA ATGTAATGAT TTCTGCTACT
GGACCTGTAT TGGTAGATTT TGGGATTGCG ATGGGCGAAG GTGAAAGCCA TGTTACTCGC
ACGGGATTAG TGATGGGCAC TCCTGGTTTT ATTGCTCCAG AAATTATTGA AGGTGGAGAT
TCAGATGAAC TTACAGATTG GTGGTCTGTT GCTGCTGTGC TTGCATTTGC GGCTACCGGT
AAGCCTGTTT TTGGCACAAA GCCTATGATG GCGGTTTTGG AGCGTGCTGC CTCAGGCAAT
GCAGATTTAA CTGGGTTACC TCCTAGAACA ATGGCTGCTT TTCGTAAGGC TTTGAATCCG
ATTCGAGAGC AGCGTTGCAT GCCATCTGAT TTAGAAAATG CAATTAGTCA AGATGCTATG
GATCCTTTAG CCTGGCCGGA GGTGAACCGC CCTTTTGACC GTAATGCCAC TAACATAACT
ATGCGTAAAA TGTGGTGTGA AACAAGTCGT GAAACAAAAG AAAAAACTGC TATACTAACA
AATTCTCGTA CCTGCGATGC AGCTGGTACA GCTGGCATAA CAAATCTTAA TTCTGATGGA
GAAATGCCAA CCGTAACTGT TCGTTCTACT ACTGTTATGC CACATTCATT AGATAATAGT
GAAGACGATA AAACATTTTG TGTGGATGAA AAAACACGAA TTAATGCGTT AAACGATGTA
GATTTTCAGA ATATACAGGA CGACAATTCA AACAATTCAC GCATTGCACA ATCTTCAAAA
CTTATTCGTT CTTCTGATAA CACTTTTGAT AATGGCAATA TTGAAAATGA AGCAGGTGAT
TCTCTACACG TTAAAAGTGA TGAAGTGTCT TCTGTTGATC CTGTTCTTAA TAAACATGAT
TATGCGCGTA GAGGAACATG GATACTGCTG ATTTGTATAA TTCTTCATTT AGCCATTGCT
TGCTTAAGCA TTCTCGATTC TATTGGTTTT GCGATGGTTT TTATGTGGAT TAGTGCAACA
TCCGGCTACA GTATTTCATC AAGCTTGCGA AGATGGCAAC TTAACGATGG AATAATTCCT
CGCCATGATT CTGTAGTGCT TATTGCAACT TTACCGTGGC ATATTATTCG AGGATTTGTT
TACATGCTTC CACGAGTTAT AGCTATTGTT GTTTCTGGAG GTATTGGAGC TGTTATATAT
CCATTTTTCT GCGGTAATAA TCCTGAATTA CTTTCTATAG ATGTTGGATC CTTGCGTATT
CTTTTACCAA CTTACTCACC TAATATTTTT TCAAGTACTG CAGTTGGATA TGCTCTAGGA
TTTATTGTTG CATGGGTTGT TTTTGCTGCA GTTAAGTGGA CTACAAAATT CCGTTTAGGA
TTAGGTGCGG TATTTTATTC TGGAAAATCA TTTGAAAAAT AA
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| Protein sequence | MEDTSMFDLQ PGTNVGGYTL ISRLGGGAMG SVWRVNDDGG NQYAMKILRA SVHAKQSEDE
DSEQERARIR LKREALALQR IHHPGVCAIV DMELDASIAF IVTELIEGHN LREDVDENGP
YIADDLERLA HKLIEAVKAV HEAGIVHRDI KPTNVMISAT GPVLVDFGIA MGEGESHVTR
TGLVMGTPGF IAPEIIEGGD SDELTDWWSV AAVLAFAATG KPVFGTKPMM AVLERAASGN
ADLTGLPPRT MAAFRKALNP IREQRCMPSD LENAISQDAM DPLAWPEVNR PFDRNATNIT
MRKMWCETSR ETKEKTAILT NSRTCDAAGT AGITNLNSDG EMPTVTVRST TVMPHSLDNS
EDDKTFCVDE KTRINALNDV DFQNIQDDNS NNSRIAQSSK LIRSSDNTFD NGNIENEAGD
SLHVKSDEVS SVDPVLNKHD YARRGTWILL ICIILHLAIA CLSILDSIGF AMVFMWISAT
SGYSISSSLR RWQLNDGIIP RHDSVVLIAT LPWHIIRGFV YMLPRVIAIV VSGGIGAVIY
PFFCGNNPEL LSIDVGSLRI LLPTYSPNIF SSTAVGYALG FIVAWVVFAA VKWTTKFRLG
LGAVFYSGKS FEK
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