| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0063 |
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| Symbol | |
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| ID | 8708882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 74372 |
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| End bp | 75754 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646482184 |
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| Product | G5 domain protein |
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| Protein accession | YP_003373332 |
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| Protein GI | 283782578 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3583] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0663704 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGTC GATGGACGCC TAGACGATTA ATAGTGATGC GTCGTGCAAG AATAATCGCC
TGCGTTTTAT CTATATCACT CACAGCAACA AGCTTGTTTA TATTTACAGC TAAAAAATCT
GTTGCAATGA TCATAAATGG AAAAACGCAT ATTGTAAGCA CTTATTCAAC AAATCCAATA
CGTTTATTGG AAGAACAACA CGTGCCAGTA AAAACTCACG ATCAAATTAT TTCTTCTTCT
GGAGATATTC TCACAAATCA TTCTACTGTA ACAGTTCGCA GTGCTTATCA AACTTCTATC
ACTGTAGATG GAGTAACTAT ACCGTTCTGG ACTGTTGCAA CTAGTGTCGA TCAATTAATC
GGCTTTTTTA AAGCTAATGC TAAGAACGCT TCACGAATTA CAGTAAATTT GCAAAATATT
TACGATAAAC TCACTTGCGG CTTATCAATT AATAAAAAAG GTCCAATTAG CGTTATCGCT
GACAGGAAAA CACGCATTGT GCAAAATGGA GACTTACCTG CGAGCGCAAT TCTTGATTCT
CAAGGTATAG TGCTCGGCAA GGAAGATCGC GTAAGCGTAG AAGAAGATGA TGGAAATACT
GTTTTACGTG TTTCTCGAGT TACTCATGGC AAAGAAACTC GTACAGTTTC ATTACCTTTT
GCCACACAAA CTGTAGTAGA TCCTAAACTT CCAGCGAATT CTCGCGTTGT ACAACAAGTT
GGCGTGAATG GTGAGCGCGA AGATGTTTAT AACGTTACAT ACGTAGATGG CAAAGCAGAA
AGCGCAACTT TAGTTTCGCA AAATTTGGTA AAGCCTGCAG TTAATCAAGT TATTGCTGTA
GGTAAGGCTG CTCCTGCACC AATTCACAAA AATAATACAA ATACGCAAAA GTCAAAACAA
TCCAAACAAC AAACAAACGC TCAACCCAAA AAGCAGAATA CTGAGCAACC TGCAAAACAG
GAGAAGAAAA ACAGCCAACA GCCAACTCAA CAACAAACCG CATCTGCAGC TCCCGCACCT
GCAGCTAATC CACCTGCACC CGCTCCAAGC TCTAATCCCG ATAGCCTTGT ACATGCTACT
CCAGAACAAG CTAAACTATT CGCTCAGGGC GCAGCTGCGC AAATGGGTTG GACCGGTAAA
GAATGGGAAG ATCTTTTATG GTTATGGAAT AGGGAATCTG GATGGAGATG GAACGCAGAA
AATCCTAGCT CACACGCTTA TGGCATTCCT CAAGCTCTTC CTGGAAATAA AATGAGCAGT
GCAGGAGCTA ATTGGCATGA AGATGCCGCA ATACAAATTA GCTGGGGTCT AAGTTACATT
AAGAGCAAAT ATAAAACACC TAGTGGAGCA GTAAAGCATT CGCGCGAAAT TGGCTGGTAT
TAA
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| Protein sequence | MARRWTPRRL IVMRRARIIA CVLSISLTAT SLFIFTAKKS VAMIINGKTH IVSTYSTNPI
RLLEEQHVPV KTHDQIISSS GDILTNHSTV TVRSAYQTSI TVDGVTIPFW TVATSVDQLI
GFFKANAKNA SRITVNLQNI YDKLTCGLSI NKKGPISVIA DRKTRIVQNG DLPASAILDS
QGIVLGKEDR VSVEEDDGNT VLRVSRVTHG KETRTVSLPF ATQTVVDPKL PANSRVVQQV
GVNGEREDVY NVTYVDGKAE SATLVSQNLV KPAVNQVIAV GKAAPAPIHK NNTNTQKSKQ
SKQQTNAQPK KQNTEQPAKQ EKKNSQQPTQ QQTASAAPAP AANPPAPAPS SNPDSLVHAT
PEQAKLFAQG AAAQMGWTGK EWEDLLWLWN RESGWRWNAE NPSSHAYGIP QALPGNKMSS
AGANWHEDAA IQISWGLSYI KSKYKTPSGA VKHSREIGWY
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