Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0060 |
Symbol | |
ID | 8708758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | + |
Start bp | 71180 |
End bp | 72607 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 646482181 |
Product | tRNA adenylyltransferase |
Protein accession | YP_003373329 |
Protein GI | 283782575 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG [TIGR02692] tRNA adenylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.451798 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGAGA ACTTCGAAGT TTGGCCTGAA GCTATAGAGT TGGGGCGACT TTTTGCTGAG CGTCATTATG AACTTGCATT AGTTGGTGGT CCTGTGAGAG ATATGCTACT GCATCGCGTG TCGCATGATC TTGATTTTTG TACATCAGCT CGACCCGAAG AGTTTGAACC TATTTTGCGT CGTTGGGGAC ATGATGGTTT TTGGGATATG GGTCGCAAAT TTGGCACGTT GGGAGCTATG CGTCGACGTG CTGATGGTAC AGAAGTAAAA GTTGAAATTA CTACATACCG TTCTGATGTG TACGATCCAG ATTCTCGTAA ACCTGAAGTG CAATATGGCG ATACTTTAGA AGGTGATCTT TCTAGGCGTG ATTTTACTGT CAACGCAATG GCGTTGCGCG TGCCAGATTT ACAGTTTGTA GATCCTTTTG GCGGTGCTAG TGATTTAGCT AAAGGCGTGT TGCGAACCCC GGTTGATCCT CGTCAATCTT TTGATGACGA TCCTTTGCGT ATGATGCGTG CAGTTCGTTT TGTTGCGCAA CTTGGGTTTA GTATCGAAGC AAATACTGCT GAAGCGATTG TGGACATGGC AGATAGGTTA GATATTGTTT CTGCTGAAAG AATTCGCGAC GAAATTACTA AAATGTTACT TTCGGACAGA CCTCGTAAAG GATTAGAAGC TCTTGTTGAA TCTGGTATAG CTCAGCGTGT TCTTCCGGAG ATTCCAGCTT TACAGCTTGA AATTGACGAG CATCATCGTC ATAAGGACGT TTTTGAACAC ACAATGATGG TTCTTGAGCG CGCTATAGCT TTGGAAACAG ATCAGGAAGG TCCAGTGCCG TCTCCAGATT TAACGTTGCG TCTAGCTGCT TTATTGCATG ATATTGGGAA GCCAAAAACT CGAAAATTTG AAGATGGAGG GAAAGTTAGT TTCCACCACC ATGATGTTGT TGGCGCAAAA ATGACTCGTA AACGTTTGAA AGCACTGCAT TTTGATCATC ATCTTATCGA AGATGTTACT GAATTAGTGA ATTTGCATTT GCGTTTTCAT GGGTATGTTG ATGAACCGTG GACTGATTCT GCAGTTCGTC GTTACGTAAA AGATTCAGGA CATCTGTATG AGCGGTTGAA CCGACTTACT AGAGCAGATG CAACCACTCA GAATCGTCGC AAATCGTTAA TGTTTGAGCA TGCGATGGAC GAGATGGAAG AGCGCGTAAA GGAGCTTAAA AAGCAGGAAG ATTTTAACGC TATTAGACCT GATGTAGACG GTAATGAAAT AATGCAATTA TTGCATTTGC AACCAGGTCC AACAGTTGGT GAGGCTTATA AGCATATGCT TGATTATCGT CTCGATAATG GTCCGGTAGA CCATGATATT GCTGTAGAAG AATTACAGCG ATGGTATGAG GAAACGTACA AAAAGTAA
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Protein sequence | MTENFEVWPE AIELGRLFAE RHYELALVGG PVRDMLLHRV SHDLDFCTSA RPEEFEPILR RWGHDGFWDM GRKFGTLGAM RRRADGTEVK VEITTYRSDV YDPDSRKPEV QYGDTLEGDL SRRDFTVNAM ALRVPDLQFV DPFGGASDLA KGVLRTPVDP RQSFDDDPLR MMRAVRFVAQ LGFSIEANTA EAIVDMADRL DIVSAERIRD EITKMLLSDR PRKGLEALVE SGIAQRVLPE IPALQLEIDE HHRHKDVFEH TMMVLERAIA LETDQEGPVP SPDLTLRLAA LLHDIGKPKT RKFEDGGKVS FHHHDVVGAK MTRKRLKALH FDHHLIEDVT ELVNLHLRFH GYVDEPWTDS AVRRYVKDSG HLYERLNRLT RADATTQNRR KSLMFEHAMD EMEERVKELK KQEDFNAIRP DVDGNEIMQL LHLQPGPTVG EAYKHMLDYR LDNGPVDHDI AVEELQRWYE ETYKK
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