| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0059 |
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| Symbol | |
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| ID | 8709125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 70316 |
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| End bp | 71092 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646482180 |
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| Product | hydrolase, NUDIX family |
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| Protein accession | YP_003373328 |
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| Protein GI | 283782574 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1051] ADP-ribose pyrophosphatase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.888267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTACTC CTGCAGACTT ACGACGTACG CTCGCCAAGC TTGCGGATAA TCATGCCCAA
AATCAAGCTG CTCCTGTTAT TACGCCACTT GATTTAGCTA AAATGCATAG AAAAAAGTCT
TGCCAGCAAG ACAGTTGTGA AGAACAAAAT GTTGTTGATA TTCCGCTGTT TTCTAAGGAT
GACAGCACTG CGCAAGACTC AGGATCACCG GAAGATAATC TTCAAAAAAC ATCTTCTTTC
TCAGGCGTAT CTCCAGCACT TATGCCACCA CGCAGACAGG CAGATACTCC TACAACTTTT
GCTTCTTTAG ATGCGCAAGA CTTGCCAATT ATTCGAGAAT ATTCCGCAGG CGGTTTAGTA
TTTGACTCTC TCGGGCGTGT CGCAATTATT GCTCGTCATT CAAGAAGCGG ACACCTTGAA
TGGTGTCTAC CAAAAGGACA TATAGAAAAA GGTGAAACAC CCCAAGAAAC AGCAGTTCGC
GAAATTCATG AGGAAACGGG TATAGTTGGC GAAGTAGTAG ATTCGATTGC CACAATCGAC
TATTGGTTTA CAGGCACAAC GCATAGAGTA CACAAGCTAG TGCACCATTT TGCGTTACGT
TACGTAAGTG GCGACTTATC TGTATTAGGA GATCCCGATC ACGAAGCAGA AGATGCAATA
TGGGTGAATT TTAAAGAACT TAATGCAATA CTAAGCTATC CAAATGAACG TAAAATTGCA
TGGCTTTATG CCAAAAAAGC ACATAGGCGG TCTAACAGTG AAGAAACTCA CGCGTAA
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| Protein sequence | MITPADLRRT LAKLADNHAQ NQAAPVITPL DLAKMHRKKS CQQDSCEEQN VVDIPLFSKD
DSTAQDSGSP EDNLQKTSSF SGVSPALMPP RRQADTPTTF ASLDAQDLPI IREYSAGGLV
FDSLGRVAII ARHSRSGHLE WCLPKGHIEK GETPQETAVR EIHEETGIVG EVVDSIATID
YWFTGTTHRV HKLVHHFALR YVSGDLSVLG DPDHEAEDAI WVNFKELNAI LSYPNERKIA
WLYAKKAHRR SNSEETHA
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