| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0044 |
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| Symbol | dnaN |
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| ID | 8709945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 52311 |
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| End bp | 53435 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 646482167 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_003373315 |
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| Protein GI | 283782561 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTAG AAGTCAACTC TGCATCATTT GCTGATGCTG TAGCTTGGAC TACACGCGTA
ATTGACTCAC GCCCTGCAAA CCCTATTCTT GCAGGCTTAA AAATTGAAGC AGCAAATGGC
ACATTGCAGC TTTCTGCATT CAACTATCAA ATTTCTAGCT GCCATCACAT CGAAGCTGGT
GTTGACGAAG AGGGAAGCAT ACTTATTCTA GGCAAATTGA TGGCAGATAT TACTAAGTCT
CTTCCTGCAG AAAAAACTTA TCTAAAATCT GAAAATAATA CTTTGACTAT TACTTCCGGA
AAATCAACAT TTACTCTACA ACTTATGCCT CTTGGAGAGT ATCCTGACTT GCCTGAACTG
CCTCATAAAT TAGGTCAGGT TGATGCACCA ACATTTATTC AAGCTGTAAA TCAAGCATCT
GTTTCTACAT CTAGAGAAGA AAATAGACCG GTTCTAACTG GAATTAGGAT CCAATTTGAA
GATGACACCG TTACTATGAC TTCTACTGAT AGATTCCGTC TATCTAGATC TACTTTTAAG
TGGACACCAG AACATAATGA CATTCATTCG ACCACTCTTA CTCGTGGGTC ATTACTAAGA
GATATTGCTC ATTCTCTCGA CGATCATCAA AATGTTATTA TCCATTTTAA TGAGGAAGAT
AAGTCACTTT TAGGTTTTGA AAATTCCGGT CGTACAAGTA CTTCACAAAT AATTGATGGA
GAATTCCCTT CTGTAGATCG ACTATTCGTA GATGAATATC CTATTCACGC AATTATTAAT
AAACAATTAT TGATAAATGC AATTAAGCGA GTATCTTTAG TCGCCGAAAG AAATGCTCCT
ATTCGAATGA TTTTTTCAAA TCAGGAGTTA ACTTTGAGTG CTGGTACTGC TGACGAATCA
CAAGCAAAAG AAGTACTTGA TATCGATATG GATGGAGAAG ACATAACTGT TGCCTTTAAT
CCGAACTACT TACTTGAAGG GTTAGGAGCT ATTCCAGAGC CATTTGTGCA TATGAAAATG
GCAACAGCTG TAAAACCTGT TGAATTTAAT GGTCAGCAGG AATCAGATGG TGATGAATCA
ACAGATTATC GCTATTTGCT TGTTCCTATG CGTTTTAATA ATTAA
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| Protein sequence | MKVEVNSASF ADAVAWTTRV IDSRPANPIL AGLKIEAANG TLQLSAFNYQ ISSCHHIEAG
VDEEGSILIL GKLMADITKS LPAEKTYLKS ENNTLTITSG KSTFTLQLMP LGEYPDLPEL
PHKLGQVDAP TFIQAVNQAS VSTSREENRP VLTGIRIQFE DDTVTMTSTD RFRLSRSTFK
WTPEHNDIHS TTLTRGSLLR DIAHSLDDHQ NVIIHFNEED KSLLGFENSG RTSTSQIIDG
EFPSVDRLFV DEYPIHAIIN KQLLINAIKR VSLVAERNAP IRMIFSNQEL TLSAGTADES
QAKEVLDIDM DGEDITVAFN PNYLLEGLGA IPEPFVHMKM ATAVKPVEFN GQQESDGDES
TDYRYLLVPM RFNN
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