Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0031 |
Symbol | |
ID | 8708949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | - |
Start bp | 36425 |
End bp | 37387 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 646482154 |
Product | kinase domain protein |
Protein accession | YP_003373302 |
Protein GI | 283782548 |
COG category | [K] Transcription [L] Replication, recombination and repair [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0515] Serine/threonine protein kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCG TTGAAGGACA GTTAGTTCAT CATCGTTATA GACTTGATCG CCGCCTTGCT CAAGGCGGTA TGGGAGAAGT TTGGAAAGGC TTTGATATTC AACTTGGGCG AATTGTTGCC ATTAAGGCGT TACGTACAGA TACCGTAAAC GTTGAAGCAA AATTACGTCG TCTTCGTGCT GAAGCGCATA ATTCAGCAAA TTTAGCGCAT CCTAATATTG CAGCATTATT TGACTATTAT GAGCACGATG GTATTGGATT CCTAATTATG GAATATGTGC CAAGTAAATC ATTGGCAGAT TTGTATCATA AAGAAAAAAT AATTGATCCT ACCAAGTTAC TTCCTATTCT TATTCAAACA GCTCGAGGAC TTTTTGTAGC TCATTCTCAT GGCGTAATTC ATCGCGATGT AAAACCTGCA AATATTATGG TTTCTGATAC TGGCAATGTG AAAATCACAG ATTTTGGTGT GTCATATTCC AGTGACCAAG AACAGATCAC TCAAGATGGC ATGGTAGTTG GAACAGCTCA ATATATTTCT CCAGAACAAG CACAAGGTGA ACAAGCTACT GCACAATCTG ATATTTATTC GTTAGGTGTT GTGGCATATG AAGGTTTGTG CGGACATCGT CCATTTACTG GAGCAACGCC GGTAGATATT GCTGCTGCAC ATGTTAATGA TCCTGTACCA CCTTTGCCAG AAAATGTTGA TTTGCAATTA CAACAGTTTA TTATGTCTAT GCTTGCAAAG AATCCAAAAG ATCGTCCAAA AGATGCATTA GTTGTGTCGA AAGTATTATC TCGTATTGAG CGCAGACTGC TAGATCAAGA AACAGCCTTC AACAATACAA CAGGAGTACT TTCTACAAAT TTGCGACAAC GAAGATGTAT TAAAAGTATG CCGCAAAACC AAGTAAATAT TATTAATATT TTTAATACCA ATGATCGCAA GGAGCAGCAA TGA
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Protein sequence | MKLVEGQLVH HRYRLDRRLA QGGMGEVWKG FDIQLGRIVA IKALRTDTVN VEAKLRRLRA EAHNSANLAH PNIAALFDYY EHDGIGFLIM EYVPSKSLAD LYHKEKIIDP TKLLPILIQT ARGLFVAHSH GVIHRDVKPA NIMVSDTGNV KITDFGVSYS SDQEQITQDG MVVGTAQYIS PEQAQGEQAT AQSDIYSLGV VAYEGLCGHR PFTGATPVDI AAAHVNDPVP PLPENVDLQL QQFIMSMLAK NPKDRPKDAL VVSKVLSRIE RRLLDQETAF NNTTGVLSTN LRQRRCIKSM PQNQVNIINI FNTNDRKEQQ
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