| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0026 |
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| Symbol | |
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| ID | 8709819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 30280 |
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| End bp | 31581 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 646482149 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373297 |
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| Protein GI | 283782543 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTACAC TTCAAGTTCC AAAAACAATA GAACCAGCAA ACGCTTCTAC ACTCACTTTT
ATTAAAGAAA ACGCACAATT GTCACCAAGT AAAGCTGCTC TTAAAGCTCC ACGCAATGCA
AACATCGACA TACCATTTGC AATTAACCAA ATAGCAGGTA GACAGATTGC GCAACAAAAA
CTACCAAAAT GGGCTTCCTG CAACGAAGTT ATATACCCTG CGCATATTTC TATGGAACAG
TGTTCTTCTC AGTCAACAGC ACAATACAAG GCAAATGTCG CAAAAGAATT ACTCAACAAA
TTAAATTCAG AAAATTTTAG TAGCACACTT GTGGACCTTA CTGGCGGCTT TGGCGTTGAT
TGCACAATAA TGTCTGAAGT TTTCGATTCT GCCATTTGTA TTGAACAGCA AAACGAACTT
TCTAGCATTG CACATCATAA TATGAATGCA CTTGGTATTA CAAACGTAAA ATGCTACAAC
AACAATAGCC TTGATGCACT CAAAAATATT CCTAAGTCAA CGGTAATATA CGTCGATCCA
GCTCGTCGTA ACAAACAAGG ATCTCGCACA TACGCTATTG AAGATTGCAC TCCAAATGTA
TTAGATCTTA AAAATCAGTT GCTCACTAAA GCAGAAATAG TGATTATTAA ACTTTCTCCA
ATGCTTGATT GGCACAAAAC AGTTAGTGAT TTCAGTGGCA ATGTAGAAGC CATACATATA
GTCGCACATA ATAACGAGTG CAAGGAACTA TTGATAATAC TCAGTAACTC TCAGCACACA
AAAGTACCAG TATATTGCGC AAACGACAAT CAAATAACTG TTATACAAGC AACTTACAAT
ACTTCAACAA ATCAGGTATC AATACAGCCT GAATCAAATG TTTTAGAAAA TAATAAAAAA
GATGAAATTT TAGATATAAA TAACTGGCCA GAATGGTCGC AATACGTTTA TGAGCCAAAT
GCAGCAATCA TGAAAGCTGG CTGTTTTTCA GTGTTAGAAA CTCAATACAA TATACAACAA
ATCAGTGCGA ATAGTCATGT TTACGTATCG GAAGAATACT ACTCAGAATT TCCAGGAAAG
ACATGGAAAA TTGAAAATAT ATGCAGCATG AATAAACGAG AAATAAAACA AACTTTTGCT
GATATTACTC ATGCAAATAT TGTTACTCGT AACTTTCCAA TACCTGTAGA AGCATTGCGC
AAAAAATTAA ACTTACAAGA TGGCGGAAAT ACAAGAATTA TTGCAACAAC TGATAGCAAT
AAAAATCATA TACTTATTCG CGCCGCAGCA GCAACAAAAT AA
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| Protein sequence | MSTLQVPKTI EPANASTLTF IKENAQLSPS KAALKAPRNA NIDIPFAINQ IAGRQIAQQK
LPKWASCNEV IYPAHISMEQ CSSQSTAQYK ANVAKELLNK LNSENFSSTL VDLTGGFGVD
CTIMSEVFDS AICIEQQNEL SSIAHHNMNA LGITNVKCYN NNSLDALKNI PKSTVIYVDP
ARRNKQGSRT YAIEDCTPNV LDLKNQLLTK AEIVIIKLSP MLDWHKTVSD FSGNVEAIHI
VAHNNECKEL LIILSNSQHT KVPVYCANDN QITVIQATYN TSTNQVSIQP ESNVLENNKK
DEILDINNWP EWSQYVYEPN AAIMKAGCFS VLETQYNIQQ ISANSHVYVS EEYYSEFPGK
TWKIENICSM NKREIKQTFA DITHANIVTR NFPIPVEALR KKLNLQDGGN TRIIATTDSN
KNHILIRAAA ATK
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