Gene Sros_9379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_9379 
Symbol 
ID8672730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp10329633 
End bp10330958 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content70% 
IMG OID 
Productputative transcriptional regulator, GntR family 
Protein accessionYP_003344740 
Protein GI271970544 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.938507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCAAG AGTCAGATCA CGGTCAGACC GTCGCGGCCC AAGGCTCCCG CATCGACGCC 
TACGTCGACC GGTACGCCGC ACGAGCTACC GGGATGGTCG CCTCCGAGGT TCGAGCTCTT
TTCGCCGTCG CGTCGAGGCC CGAGGTGGTC TCGCTCGCCG GTGGCATGCC GTACGTCACG
GCACTCCCCC TCGACACCGT GGGGGAGCTC GTCGCCGATC TGGTGGCCCG CCGGGGCCCG
GTCGCCCTGC AGTACGGCTC CGGCCAGGGC GACCCGCACC TGCGCGAGCA GATCTGCGAC
GTCATGCGCA TGGAGGGGAT CGAGGCCAAC GCCGACGACG TCGTGGTGAC CGTCGGTTCG
CAGCAGGCAC TCGACCTGAT CACCCGCATC TTCATCGACC CCGGCGACGT CATCCTCGCC
GAGGGGCCCT CCTACGTGGG CGCGCTGGGC ACCTTCTCCG CCTACCAGGC CAAGGTCATC
CACATCGCCA TGGACGACGA GGGGATCATC CCCGAGTCGC TCGCCCAGAC CATCTACGCC
CTCAAGACCG CGGGCAGCCC GATCAAGTTC CTGTACACCA TCCCCACCTT CCAGAACCCC
GCCGGAGTGA CGCTCAACGT GGCGCGCAGG CAGCAGGTGC TGGACATCTG CCAGCGAGCC
GACGTGCTGA TCGTCGAGGA CAACCCGTAC GGCATGCTCG GCTTCGACGG TGAGCCCATG
CGGGCGCTGC GCGCCGACAA CGCCGACGGC GTGGTCTACC TCGGCTCGTT CTCCAAGACC
CTGGCCCCCG GTTTCCGGGT CGGCTGGGCG CTGGCCCCGC ACGCCATCCG CGACAAGCTG
GTGCTCGCGA TGGAGTCTGC GGTCCTGTCC CACTCCTCCT TCACCCAGCT CGCCGTCGGG
CAGTACCTCG CCACCCAGCC GTGGCGTGAG CAGATCAAGA CCTTCCGGGA GCTCTATCGC
GAGCGGCGGG ACGCCATGCT CAGCTCGCTT GAGGCCCTCA TGCCCGCCGA CTTCACCTGG
ACCCGCCCCA GCGGCGGTTT CTTCGTCTGG GCCACCCTGC CCGAGGGGCT CGACTCCAAG
GCGCTCCTGC CACGCGCGGT CTCCGAGCGG GTGGCCTTCG TCCCGGGCAC CGGCTTCTAC
GCCGACGGCG GCGGTGCGCG GCACATGCGG CTGTCCTACT GCTACCCGGA GCCCGACCGC
ATCCGCGAAG GCGTCCGCCG CCTGGCCGGA GTGATCGAGC AGGAGCTGCG GCTGCGCGAC
ACGTTCGGCA CCGGCTCCTC TCCCGACCAC ATCGGAGTGG ACACCCCGGG GCCGGATCTC
GCCTGA
 
Protein sequence
MPQESDHGQT VAAQGSRIDA YVDRYAARAT GMVASEVRAL FAVASRPEVV SLAGGMPYVT 
ALPLDTVGEL VADLVARRGP VALQYGSGQG DPHLREQICD VMRMEGIEAN ADDVVVTVGS
QQALDLITRI FIDPGDVILA EGPSYVGALG TFSAYQAKVI HIAMDDEGII PESLAQTIYA
LKTAGSPIKF LYTIPTFQNP AGVTLNVARR QQVLDICQRA DVLIVEDNPY GMLGFDGEPM
RALRADNADG VVYLGSFSKT LAPGFRVGWA LAPHAIRDKL VLAMESAVLS HSSFTQLAVG
QYLATQPWRE QIKTFRELYR ERRDAMLSSL EALMPADFTW TRPSGGFFVW ATLPEGLDSK
ALLPRAVSER VAFVPGTGFY ADGGGARHMR LSYCYPEPDR IREGVRRLAG VIEQELRLRD
TFGTGSSPDH IGVDTPGPDL A