Gene Sros_9363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_9363 
Symbol 
ID8672714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp10309681 
End bp10312149 
Gene Length2469 bp 
Protein Length822 aa 
Translation table11 
GC content70% 
IMG OID 
ProductMembrane carboxypeptidase (penicillin-binding protein)-like protein 
Protein accessionYP_003344724 
Protein GI271970528 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.575493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGGC GCGACCCCGA CCCGGCCCCC GGCCGCCGTC CCGAGGCCGC CTTCGAGGAC 
ACCCAGGCCA TGCTCGCCGC CCAGGCGAGG AGCGAGCGCT CCCCGGGCTC CGGTCCCGGC
GGGCGGAGCA GGCGCGGCCG GGCCGGGCGC GCCGTCGCGG CGGAGGACAC CGTGGTCTCC
GGCGGTCCCG GCGGTCCCGG CGGTCCCGGC GGACGCGGCG GACGCGGACC GGGCGGCCGC
GGTCCCGGCG ACGGCGACGG CGACGACGAG CCCGACAGCC GGGGATGGAA GCGTTTCGTC
CCCAGCTGGA AGATCGTGCT GGCGAGCTTC ACGGTCGTCA CCGCGGGTGT CTTCGGCATG
ATCGCGGTCG GCTACGCCAA CACGCCCGTC CCCTCGGCCA CGGACAAGCA GGACAGCGTG
GACGACCAGG GCAGCGTCAT CTACTACAGC GACAAGACCC CGCTCGCCCG CCTCGGCGTC
AAACGGACGC TGGTGACGAT CGACAAGATC CCGCGGCACG TCCAGGACGC GGTGATCGCC
GCGGAGAACC GCAGCTTCCG CGAGGACAAC GGCATCGACT TCAAGGGCAT GGCCAGGTCG
CTGTGGAGCA CCGTGAGCGG CGAGCAGGTC CAGGGCGCCT CGACCATCAC CCAGCAGATG
GCCCGTAACT ACTACGACGG CCTCAGCCAG GAGCGGTCGA TCCAGCGGAA GGTCAAGGAG
ATCTTCGTCG CGATCAAGCT GGACAAGGAG ATCAGCAAAG AGGAGATCCT GACCCAGTAT
CTCAACACCA TCTACTTCGG ACGGGGCGCC CACGGCATCC AGGCCGCGGC GCAGGCGTTC
TTCAACAAGG ACGTCGACAA GCTGACCCCG GAGATGGCGG CCTACCTCGC CGGCCGCATC
CAGAACCCCG ACGCGTTCGA CCGCGCCGAG AACGCCAAGA ACCTGGCCTC CACCCAGGAG
CGCTACGACT ACGTGATCAA GGGCATGGCC CAGATCGACC CGGCCAAGTA CGGCTCGCTG
CCCGCCAAGT CCCCCACGGC CCCCAAGCGG ATCGCCGTCC GCAACAAGGA CTACTACGCG
GGCATCAAGG GATACATGAT CACCGAGGTG CTCCGGGAGC TCAAGCGCAA GGGCATCAGC
CAGGAGGACG TCGAGCGGGG CGGCTACAAG ATCTACTCCA CGTTCGACAA GCGCCTGATG
CTGGCGGCCA AGAAGGCGGT CCAGGAGAAC ACCTCCGGCC TCTCCTCCGA GATCCACACC
GGCCTCGCGG CCGTGGATCC CCGCAACGGG CGGGTCGTCG CCTTCTACGG GGGGCCCAAC
TTCCTCAAGC GCGAGTGGAA CGACGCGTTC ATGTCCGAGA AGCAGGCGGC GTCGGCGTTC
AAGCCCTACG TGCTGGCCGC CTGGCTGGAG GCCGGCAACA GCCTCAACAG CTACCTGCTG
GGCAAGGGCC CTATCAAGGC GCCGGGCACC AACGACATCA AGAACTCCCA CGACATCCCC
GGCGGCTCGG TCAACACCAT CAGGGCCACC GCCGAGTCCG TCAACACGGC GTTCGTGCAG
ATGGGCATGG AGGTCGGCCT GGAGGAGGTC GTCAAGATCG CGGCCGGGGC GGGCATCGGC
GAGGACAACC TCCAGAAGAC CGTGAAGGAC CACGCCTTCG CCCTCACCAT CGGCTCCGGC
CCGGTCACCC CGGTCCAGCA GGCCGGCGGT TACTCGATCT TCGCCAACGA GGGCAAGCAC
TTCGAGAACC ACGTCGTGAT CAAGGTCGTC GACCGCGACA AGACGGTGGT CCTCCCGGAG
AGCACCCAGC ACACCCAGGT CATCAGCCCC GACAGCGCGG CCGACGCAAT CGTCGCCCTG
GAGCAGGTCG TCAAGGACCC CCGGGGCACC GGCAGGGCCG CGGCCCTCTA CGACCGGCCG
GTGGCGGGCA AGACCGGCAC CAACGACGAG AACAAGGAAG CGTGGTTCGT CGGGTTCACC
CCGCAGCTGT CCACCGCCGT CGGCATGTAC CGGCAGGACA AGAAGACGAA CGCCGAGGAG
TCGCTGGGCG CCGAGATCCA GGGCGCCACG TATCCCACCC GGGTGTGGCA CGCCTTCATG
GCGGAGGCGA TGAAGGGCAA GGAGGTCATC CCCTTCCCGC CGCGCGCCAA CGTCGGCACG
GACAACAACA TCGTCCCCAA GCCCACCCCG ACGCCGACCC CGTCGCCCAC GCCGGACCCG
TTCGGCACCG AGGACCCGGG CGACGACGGC ATCCCCGAAG ACCTCGGGGA CCAGCAGCCC
TCGCCTGACG ACCAGGGCTG CCTGCCCGGC GACATCACCT GTGACTCCAC GGGGGACGAC
ACCGGCTTCC CGGACGAGAA CGGCGACGGC GGCGGCGACG GCGGCGGCGG CGACATCGGC
AGCAACGGCG GCGCCCCCGC CGCGGTCGCG CCGGACCCCA GGGGCAGACC GTCCGGGCAG
CGTCCCTGA
 
Protein sequence
MRRRDPDPAP GRRPEAAFED TQAMLAAQAR SERSPGSGPG GRSRRGRAGR AVAAEDTVVS 
GGPGGPGGPG GRGGRGPGGR GPGDGDGDDE PDSRGWKRFV PSWKIVLASF TVVTAGVFGM
IAVGYANTPV PSATDKQDSV DDQGSVIYYS DKTPLARLGV KRTLVTIDKI PRHVQDAVIA
AENRSFREDN GIDFKGMARS LWSTVSGEQV QGASTITQQM ARNYYDGLSQ ERSIQRKVKE
IFVAIKLDKE ISKEEILTQY LNTIYFGRGA HGIQAAAQAF FNKDVDKLTP EMAAYLAGRI
QNPDAFDRAE NAKNLASTQE RYDYVIKGMA QIDPAKYGSL PAKSPTAPKR IAVRNKDYYA
GIKGYMITEV LRELKRKGIS QEDVERGGYK IYSTFDKRLM LAAKKAVQEN TSGLSSEIHT
GLAAVDPRNG RVVAFYGGPN FLKREWNDAF MSEKQAASAF KPYVLAAWLE AGNSLNSYLL
GKGPIKAPGT NDIKNSHDIP GGSVNTIRAT AESVNTAFVQ MGMEVGLEEV VKIAAGAGIG
EDNLQKTVKD HAFALTIGSG PVTPVQQAGG YSIFANEGKH FENHVVIKVV DRDKTVVLPE
STQHTQVISP DSAADAIVAL EQVVKDPRGT GRAAALYDRP VAGKTGTNDE NKEAWFVGFT
PQLSTAVGMY RQDKKTNAEE SLGAEIQGAT YPTRVWHAFM AEAMKGKEVI PFPPRANVGT
DNNIVPKPTP TPTPSPTPDP FGTEDPGDDG IPEDLGDQQP SPDDQGCLPG DITCDSTGDD
TGFPDENGDG GGDGGGGDIG SNGGAPAAVA PDPRGRPSGQ RP