| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_9297 |
|---|
| Symbol | |
|---|
| ID | 8672645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 10252245 |
|---|
| End bp | 10252841 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003344658 |
|---|
| Protein GI | 271970462 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.775461 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAGTG CCAAGAACGG ACGCGACGGC CGTACCCGGA TCGTCGAGGG TGCCCTGCGT
CGATTCAGCC AGGACGGTGT CTCGGCCACC ACGCTGGCCA GCCTCCGCGA GGAGAGCGGC
GTCAGCGTGG GGAGTTTTTA CCACCACTTC GCCAGCAAGG AGCACGTCTT CGGCGTGCTC
TACGCCGACA CCCTCCGGAT GTACCAGGAG GCGTTCCTCG CCGAGCTGCG GCGCCACGAG
GGCGCCCGCG AGGGCATCGA GGCCATCGTC GCGCTGCACA TGGCCTGGTG CGGGGAGAAC
CGCGAGCGGG CTCACCTGCT GATCAGCGAG CGGCCGCCCA AGCGTGACGA GCCGGGCGGC
ACCGAGGTGT CGGATTCGCG GCGGGCGTTC TTCAAGCAGG TCTCCGACTG GTGGCGCCCC
CACATGAAGG ACGGCCTGCT CCAGCCTGTC CACCCGACCA TGTGCTACGT GCTCTGGCTG
GGCCCCGCCA ACGAGATGTG CCGCCTGTGG TTCGCCGGGG CCCACCACCC CACGCAGGAG
GAGATAGCAG GCCTCTGCGA GGCCGCCTGG CAGGGCCTGC GCCAGCAGCC CGCCTGA
|
|---|
| Protein sequence | MKSAKNGRDG RTRIVEGALR RFSQDGVSAT TLASLREESG VSVGSFYHHF ASKEHVFGVL
YADTLRMYQE AFLAELRRHE GAREGIEAIV ALHMAWCGEN RERAHLLISE RPPKRDEPGG
TEVSDSRRAF FKQVSDWWRP HMKDGLLQPV HPTMCYVLWL GPANEMCRLW FAGAHHPTQE
EIAGLCEAAW QGLRQQPA
|
|---|
| |