Gene Sros_9250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_9250 
Symbol 
ID8672598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp10200096 
End bp10201766 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003344611 
Protein GI271970415 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.357084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.998614 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACAC CCTCACGTAA GGCCTCACGC GCGACGGTGA TCACTGTAAG CATCGCAATC 
GGCGTGTTCG GGGCCGGCGC CGGGCTGGGA ACCGTCATCG CCTCCCGTTC CCATCCCGAC
GAGGGGCAGG TGCTGCGCCT GGCGGCGGGC ACCTATCACC TGGCCGACGG CGAGCGGGCG
TGGAAGTCCC GAGGAGCGGC CGACAGGGAT CAAGGCGTCC CTCTCTCCGG CGCCGACGAG
GGCAGCACGA TCGCGAAGAA GGAGTCCAAG GACCCCCGGC TCTGCCTGAC CGCCACCGCC
GACGGGCACG CGGTCGGCGG CGGCGCGGCG GGGTGCGTCG CCCTTCCCGC GGTCCTGGCC
GGCGCCGCCG CCCCCCTGCA GCGGCCGGGA AATCCCAGGA GCACGGGGTC GGCACCGCCC
AAGAAGGCCT CCTCGGCCCC GGAACCCCGC CGCTCGACGG CGGCGCAACC CGCCCCGGCC
ACCCGCCGCA CGGCGGCGCA GCCCGATCCG GCCCCCCCAC GTACGGCGGC GCAACCACCT
CCGGCGAGAC CGGTCCGCTC CGCGCCCTCC CCGACGCAGA CGAAGAAGAT CGCCGGCGAC
ATCTCGGAGA GCGGCAGCCT GGTCGAGAAG CCCGCGGCGC AGGCCGAGAA GAAACGTGAC
GTCAACACCG CTCCGAAGGA GCCGACTCCC AAGTCCGCAC CGCCTTCGGG GACCCCCCGG
CCGGAGGCGT CCCCCAGCGC CGTCCAGCCC ACGCCCCCTC CGAACACGGC CAAGCCCACC
GCGACCACCA CGCCTCCGGG CACCGCGGAG CCGAGCCGGC CGACGGCGAC CCCGAGACCT
TCGCACACCC ACAGGAAGCG GAACCCCCAC CGTCCGGGGA ACCCCACCCC TTCGGGCACC
CTCCCGCCGG CCCAGCCCTC AAGCCCCGTC ACGCCCTCCC CGGACACGCA GCTCCCCACT
CCGGCCCCGG ACACGCAGCT TCCCTCGCCG GACCAGAACC CGTCCCAGAC TCCCGACGCA
ACCGTGCTGC CAACCGCCCA GCCGTCCGCT CCGAACGGGG AGATCACCGA GAACGGCGAC
TCCCTGCCGA TCTTCCAGGA CCCGGAGCTG CTGCGGCGGG CCCAGGAGGC CCTGGGACTG
GACAGGAACA TGCGCTACAC GGATGAGAAC GGCGTATGGG ACCTCAACAT CGCCCCGCCG
GGCACTCCCC CGTGCCGGAA CTACTCGGCC GCCGAGCTTC AGAAGCTGGA TGCGCCCCAG
AGCGGCAGCC CGGCCATCCC CCGCGACTCG TGCCAGTGGC CCGCCTTCAT CCGCTGGCTC
TACGCGGAGC CGGCGCCCGG GGAGGTCAGC AACTGGACCA AGTTCACCGG CCTGCCCGAG
CGGAACCTGG AGCTCGTGGT GACGGATCCC TCCACCCTGC CGCCCGCGCC GGCCGGCACC
AGCCAGGTCG AGCCGGACAC CGGCCAGGTC CAGCCCGACA CCCGCCAGAT CCGGCCTGAC
ACCCGCCAGG TCCAGCCGGA CACCCGCCAG GTCCAGCCCG GAACCGGCCA GGTCCAGCCG
GACACCCAGC AGATCCGGCC TGACACCCGC CAGGTCCGGC CCGACACCGG CCAGGTCCAG
CCTGGCACCG GCCAGGTCCA GCCGGACCCG TTCGGATACA ACGACCAATG A
 
Protein sequence
MMTPSRKASR ATVITVSIAI GVFGAGAGLG TVIASRSHPD EGQVLRLAAG TYHLADGERA 
WKSRGAADRD QGVPLSGADE GSTIAKKESK DPRLCLTATA DGHAVGGGAA GCVALPAVLA
GAAAPLQRPG NPRSTGSAPP KKASSAPEPR RSTAAQPAPA TRRTAAQPDP APPRTAAQPP
PARPVRSAPS PTQTKKIAGD ISESGSLVEK PAAQAEKKRD VNTAPKEPTP KSAPPSGTPR
PEASPSAVQP TPPPNTAKPT ATTTPPGTAE PSRPTATPRP SHTHRKRNPH RPGNPTPSGT
LPPAQPSSPV TPSPDTQLPT PAPDTQLPSP DQNPSQTPDA TVLPTAQPSA PNGEITENGD
SLPIFQDPEL LRRAQEALGL DRNMRYTDEN GVWDLNIAPP GTPPCRNYSA AELQKLDAPQ
SGSPAIPRDS CQWPAFIRWL YAEPAPGEVS NWTKFTGLPE RNLELVVTDP STLPPAPAGT
SQVEPDTGQV QPDTRQIRPD TRQVQPDTRQ VQPGTGQVQP DTQQIRPDTR QVRPDTGQVQ
PGTGQVQPDP FGYNDQ