Gene Sros_9223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_9223 
Symbol 
ID8672570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp10171077 
End bp10173728 
Gene Length2652 bp 
Protein Length883 aa 
Translation table11 
GC content69% 
IMG OID 
ProductDNA topoisomerase 
Protein accessionYP_003344584 
Protein GI271970388 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAGCCA AGAACGGCAA CGCCGGCGGA ACCCGCCTGG TGATCGTCGA GTCGCCTTCC 
AAGGCGAAGA CCATCGCTGG GTACCTCGGC CGCGGCTACG TCGTGGAGTC CAGCATCGGG
CATATTCGCG ATCTCCCCGA GAAGGCCGAC GACATCCCCG AGAAGTACAA GGGTGAGTCG
TGGGCCCGCC TGGGCGTCAA CGTGAATAGC GAGTTCGAGC CGCTCTATGT CGTCAACCAC
GACAAGAAGG CGCAGGTGAG CAAGCTCAAG CAGCTGCTCA AGGACGCCGA CGAGCTCTAC
CTCGCCACTG ACGAGGACCG GGAGGGCGAG GCGATCGCCT GGCACCTGCG CGAGGTGCTC
AACCCCAAGG TGCCGGTTCA CCGCATGGTG TTCCACGAGA TCACCCCGCG GGCGATCCAG
GAGGCGGTGG CCAACCCGCG TGCCCTGAAC CTGCGGCTGG TCGACGCCCA GGAGACCCGG
CGCATCCTCG ACCGTCTCTA CGGCTACGAG GTCAGCCCGG TCCTGTGGAA GAAGGTCAAG
CCCCGCCTGT CCGCCGGTCG CGTGCAGTCG GTGGCGACCC GGCTGGTCGT GGAGCGCGAG
CGCGAGCGGC TGGCGTTCAC CAGCGCGAGT TACTGGGACC TGCAGGCGCT GTTCGACACC
GGTCGCGACG AGGCGCCGCG CGAGTTCACC GCCACGCTGA CCGGCGTGGG CGGCAAGCGC
GTCGCCCAGG GGCGTGACTT CGCGAGCAAC GGCAGGCTCA AGAGCGCCGA TGTGGTCCAC
CTGGACGAGC AGGCGGCGCG GGCCCTGGCC GGGCGGCTGA GCGGCACGGC CTACAAGGTC
AACTCGGTCG AGCGCAAGCC GTACACCCGC AAGCCGTACG CGCCGTTCCG GACGACCACG
CTGCAGCAGG AGGCCAGCCG GAAGCTGGGC TTCTCCGCGA AGTCGACCAT GCAGGTCGCC
CAGCGCCTGT ACGAGAACGG CTTCATCACC TACATGCGTA CCGACAGCAT CACGCTGTCG
GAGACCGCCG TCGCCGCCGC GCGCAGCCAG GCCATCAAGC TGTACGGCGC GGCGTACGTG
CCCGACAAGC CGCGCGCCTA CGCCAGCAAG GTGAAGAACG CGCAGGAGGC GCACGAGGCG
ATCCGCCCCT CGGGTGAGGA GTTCCGCACG CCGGGCGAGA CCGGGCTGAG CGGCGACATG
TTCCGGCTGT ACGAGCTGAT CTGGCAGCGG ACCGTCGCCT CGCAGATGAA GGACGCGGTC
GGGGAGTCGG TCACCGTCAA GGTGGGCGGC ACCTCCAGCT CCGGCGAGCA GGTCGAGTTC
GGCGCCACCG GCCGGACCAT CACCTTCCAC GGCTTCCTCA AGGCCTACGT CGAGGGCGCG
GACGACCCGT CCACCGACCG TGACGACTCC GAGAAGCGCC TGCCGAACCT GGACGAGGGC
GACCGTCTCA CCGCGGCCGA GCTCAACGTG CTCTCGCACG CCACCAAGCC GCCCGCGCGC
TATACCGAGG CCTCGCTCAT CAAGGAGCTG GAGGACCGGG AGATCGGCCG TCCCTCGACC
TACGCGTCGA TCATCGGAAC GATCCTGGAC CGCGGTTACG TGTTCAAGAA GGGCACGGCC
CTGGTGCCGT CCTTCCTGGC GTTCGCGGTG GTCAACCTGC TGGAGCAGCA CTTCGGCCAC
CTCGTCGACT ACGACTTCAC GGCCGACATG GAGAAGGTCC TCGACGACAT CGCCAACGAC
CGGGCGGAGC GGGTGCCCGA GTTGCGCCGC TTCTACTTCG GCGAGGAGGG CGACGAGGGC
CTGAAGGAGA TGGTGACCGA TCTCGGCGAG ATCGACGCCA AGGAGATCAG CTCCTTCTCG
ATCCGGGGCA CCGACATCAT GATCCGGGTG GGCCGTTACG GTCCCTACCT GGACCGCGAG
GGCGCCCGGG TGAACGTGCC CGAGGACCTG GCGCCCGACG AGCTCACGGC CGAGCGGGCC
GAGGAGCTGT TCTCGCGTCC CACGGGCGAC CGGGAGCTGG GCAGGGACCC GGTCACCGGT
CACATGATCG TGGCCAAGGA CGGCCGTTAC GGCCCCTACG TGACCGAGGT CCTCCCCGAG
GAGCCGCCGC CGGCCGAGGG GAAGAAGAAG GCGAAGAAGG CCGACGCGCC CAAGCCGCGC
ACGGGGTCGC TGCTGAAGTC GATGTCCCTG GACACCATCA CCGTCGAGGA CGCGCTGAAG
CTGCTGTCGC TGCCCAGGAA GCTCGGCGAG ATCGACGGCC AGGAGGTCAC GGCGCAGAAC
GGCAGGTTCG GGCCCTACGT GAAGAAGGGC ACCGACTCGC GCTCCCTGGC GTCGGAGGAG
GAGATGTTCA CCGTCACGCT GGAGCAGGCC AAGGAGCTGT TCGCGCAGCC CAAGGCCCGG
GGCAGGCGTG CCGCCGCCGC GCCTCCGCTG CGTGAGCTCG GCGAGGATCC CGTCTCCAAG
AAGCCGATCG TGGTCAAGGA GGGCCGCTTC GGCCCGTACG TGACCGATGG CGAGACCAAC
GCCTCCCTGC GCAAGGGCGA CGAGGTCGAG CAGATCACCA CCGAGCGCGC CGCCGAGCTC
CTCGCCGACC GCCGCGCCCG CGGCCCGGCG CCCAAGCGGC CCACCCGCCC CAAGGCCAAG
GCGAAGGCCT GA
 
Protein sequence
MPAKNGNAGG TRLVIVESPS KAKTIAGYLG RGYVVESSIG HIRDLPEKAD DIPEKYKGES 
WARLGVNVNS EFEPLYVVNH DKKAQVSKLK QLLKDADELY LATDEDREGE AIAWHLREVL
NPKVPVHRMV FHEITPRAIQ EAVANPRALN LRLVDAQETR RILDRLYGYE VSPVLWKKVK
PRLSAGRVQS VATRLVVERE RERLAFTSAS YWDLQALFDT GRDEAPREFT ATLTGVGGKR
VAQGRDFASN GRLKSADVVH LDEQAARALA GRLSGTAYKV NSVERKPYTR KPYAPFRTTT
LQQEASRKLG FSAKSTMQVA QRLYENGFIT YMRTDSITLS ETAVAAARSQ AIKLYGAAYV
PDKPRAYASK VKNAQEAHEA IRPSGEEFRT PGETGLSGDM FRLYELIWQR TVASQMKDAV
GESVTVKVGG TSSSGEQVEF GATGRTITFH GFLKAYVEGA DDPSTDRDDS EKRLPNLDEG
DRLTAAELNV LSHATKPPAR YTEASLIKEL EDREIGRPST YASIIGTILD RGYVFKKGTA
LVPSFLAFAV VNLLEQHFGH LVDYDFTADM EKVLDDIAND RAERVPELRR FYFGEEGDEG
LKEMVTDLGE IDAKEISSFS IRGTDIMIRV GRYGPYLDRE GARVNVPEDL APDELTAERA
EELFSRPTGD RELGRDPVTG HMIVAKDGRY GPYVTEVLPE EPPPAEGKKK AKKADAPKPR
TGSLLKSMSL DTITVEDALK LLSLPRKLGE IDGQEVTAQN GRFGPYVKKG TDSRSLASEE
EMFTVTLEQA KELFAQPKAR GRRAAAAPPL RELGEDPVSK KPIVVKEGRF GPYVTDGETN
ASLRKGDEVE QITTERAAEL LADRRARGPA PKRPTRPKAK AKA